Pairwise Alignments

Query, 236 a.a., hemolysin III family channel protein (RefSeq) from Shewanella loihica PV-4

Subject, 205 a.a., COG1272: Predicted membrane protein hemolysin III homolog from Pseudomonas fluorescens FW300-N1B4

 Score =  136 bits (343), Expect = 3e-37
 Identities = 73/202 (36%), Positives = 121/202 (59%), Gaps = 2/202 (0%)

Query: 36  ELANALSHGLGVIAGILALAFSLHKGWDRLTNLQLGGLALYCLSIILLFLCSTLYHSVSA 95
           E  NA +H +G +A  +   + L       +  ++  +A+Y  ++++L+  ST+YHSV  
Sbjct: 5   ERLNAWTHLVGAVAAFVGGVWLLVIASMDGSPWKIVSVAIYAFTLLVLYSASTVYHSVRG 64

Query: 96  PKLKHKLKIADHCAIYLLIAGTYTPLMQILLDSVEADAILIAIWSLALGGILFKTLFIHR 155
            K K  ++  DH +IYLLIAG+YTP   + L       +   +W LAL GIL +      
Sbjct: 65  RK-KAIMQKVDHFSIYLLIAGSYTPFCLVTLRGPWGWTLFGIVWGLALIGILQEIKPRSE 123

Query: 156 FKIFSLVLYLVMGWLCVIVMKQLLAAMTPLGFQLLLAGGIFYSTGVIFY-VGKRIPYNHA 214
            +I S+V+Y VMGW+ ++ +K LLAA+ P+GF  L +GG+ Y+ G+IF+ +  R+ + H 
Sbjct: 124 ARILSIVIYAVMGWIVLVAVKPLLAALGPVGFTWLASGGVLYTVGIIFFALDHRLRHAHG 183

Query: 215 IWHLFVLAGALSHFLCVYLTVI 236
           +WHLFV+AG++ HF+ +   V+
Sbjct: 184 VWHLFVIAGSVLHFVAILFYVL 205