Pairwise Alignments

Query, 205 a.a., Holliday junction DNA helicase RuvA (RefSeq) from Shewanella loihica PV-4

Subject, 204 a.a., Holliday junction branch migration protein RuvA from Vibrio cholerae E7946 ATCC 55056

 Score =  252 bits (644), Expect = 3e-72
 Identities = 130/205 (63%), Positives = 157/205 (76%), Gaps = 1/205 (0%)

Query: 1   MIGRLRGLLVEKQAPEVLIETGGVGYEVQMPLTSFYELPELNQEAVIYTHFVVREDAQLL 60
           MIGRLRG L+EK  P++LIE GG+GYEVQMP++  YELP + +EA+IYTHFVVREDAQLL
Sbjct: 1   MIGRLRGTLIEKLPPQILIEVGGIGYEVQMPMSCIYELPNIGEEAIIYTHFVVREDAQLL 60

Query: 61  YGFITKQERALFRLLIKTNGVGPKLALTILSGMTAGEFVKCVEHDDIATLVKLPGVGKKT 120
           YGF T  ERALFR +IK NGVGPK+ L ILSGMTA +FV CVE +DI+TL+KLPGVGKKT
Sbjct: 61  YGFNTVSERALFREVIKANGVGPKMGLAILSGMTANQFVTCVEKEDISTLIKLPGVGKKT 120

Query: 121 AERLLVEMRDKLKSLMEASHGNEREFVLQSNYTPAPVVNTAEEDAISALLALGYKPAQAS 180
           AERL+VEM+D+LK                 + TP  +   A+E+A+SALLALGYKP QAS
Sbjct: 121 AERLVVEMKDRLKGWGAGDLFTPATDAAPVDSTPV-IAQNAQEEAMSALLALGYKPPQAS 179

Query: 181 KAVSSVFEEGMDSETLIKASLKSML 205
           KAVS V + GM SE LI+ +LKSM+
Sbjct: 180 KAVSQVAKAGMSSEELIREALKSMV 204