Pairwise Alignments

Query, 836 a.a., TonB-dependent receptor (RefSeq) from Shewanella loihica PV-4

Subject, 966 a.a., hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  318 bits (814), Expect = 1e-90
 Identities = 269/964 (27%), Positives = 419/964 (43%), Gaps = 151/964 (15%)

Query: 5   SRLAAAVKLSLIATVSTSGYFVANNAVAAEESASFERIAVTGSRIQRQDMETASPVTVID 64
           S L+ +V  +L  TV    +       A + + + + + VTGSR++R D ETA+PV  + 
Sbjct: 22  SFLSLSVAAALGLTVGADLH-AQQTPAAGDATQTLDSVVVTGSRLRRVDTETANPVVTVS 80

Query: 65  ASAIRAEGYNSVDEILQAQPAMAGMAVGSTTNNGAD-GVAQVDLRGMGASRTLVLLNGRR 123
              I A G  +V ++LQ  P++AG A    TNNG   G + V LRG+G  RTLVL+NG R
Sbjct: 81  QEQIAATGKATVGDLLQELPSIAGNATNPYTNNGGGTGASAVSLRGLGDKRTLVLVNGIR 140

Query: 124 MVNSGSGADSAVDLNTIPVAMIARVEILKDGASAVYGSDAIAGVVNIITKKDFEGFQLDI 183
           +  +        D+N IP +MI R+E+L DGASAVYGSDAI GVVN I +  F+G Q   
Sbjct: 141 LAYN--------DVNAIPASMIERIEVLSDGASAVYGSDAIGGVVNFILRTRFDGVQFSS 192

Query: 184 NGGATDKGDGENVEISALYGFNTDGGNYTFGVAYSDRGGVMQKDRDWVE----------- 232
           + G + + DG     +   G   + G+   G++Y +   V    RD+ +           
Sbjct: 193 DFGTSKERDGNRRNFALTAGKTFERGSLIAGLSYHNIDPVSAAARDYSKDALALTDGVPV 252

Query: 233 KGASSFIPTGSLGGKVQDENGNWVDRTEG---------------------YDFTQDSW-- 269
           K  SS  PTG++      +  + + +  G                     YD   DS+  
Sbjct: 253 KQGSSATPTGTVNFNDGSDASSQLRQANGCTRVTLNGGVSGRAGPGDFHCYDAAADSYNY 312

Query: 270 -----LQTPNERYSFFANATQEFANEIVFTGDLLYTKRQSEQMMAAQPASVMLDVCTPTS 324
                LQTP +R + F   T  F++ +    +  ++K +S  ++A  P           S
Sbjct: 313 QPFNLLQTPQKRTNAFVLGTYRFSDSVEGYVNTWFSKTESASIIAPIPI---------FS 363

Query: 325 TGNCITLTDE-------MVAGGITPDDQGRVEYRRRTTDAGNRIYEQDTDTLRVSAGLAG 377
            G+ I ++ +       +  G          ++  R T  GNR Y+ +T   ++S GL G
Sbjct: 364 NGDNILVSSQSYYNPFGVNFGTDRSSGTSYNDFNTRATVLGNRSYQYNTYNFQISPGLRG 423

Query: 378 EFDVHTGIAWDLSYTYGKNKAETWVHNSINAKNMAQSV----YDNQDAWFSGD------- 426
            F   +   WD ++ YGK K ++  +  ++     Q++     D+      G        
Sbjct: 424 RFG-DSSWQWDATFNYGKVKQKSINNGFLDYATFNQAIGPSFLDSDGVVKCGSAGAAIAG 482

Query: 427 --PLSQAIVDDISYLESTTGGNEQHIVSGV---------ISGEAFDLEAGPVAYAIGAEY 475
             PL+   ++D S L +  G     IV+ V          +G  FD+ AG  + A G  Y
Sbjct: 483 CTPLNFFNLNDSSNLATLQGMVVNPIVTSVYTVKQFEANANGTLFDMPAGAASLAAGLSY 542

Query: 476 RHDSGYYNPDPVIVAGEGTAAQ-----QDPTDGSYSVVSVYQEVSVPFTDKLTGEFAL-- 528
           R +      DP+    E               GS+ V   Y E   P    L G  AL  
Sbjct: 543 RKERSTTTSDPLWTGDEDGLCGVIEYCASTLSGSFDVKEAYAEALFPLLKDLPGINALNI 602

Query: 529 ----RFDDYSTFGNASTWKIGLTYEATDDLMLRAVAATGFRAPNVSELFGGNVGSYDYLD 584
               RF DYS+ G+ +  K+ L Y   ++L+LR   +  FRAPN++EL+ G  G    ++
Sbjct: 603 TLGTRFSDYSSVGSKTNSKVSLEYRPIENLLLRGTVSQVFRAPNINELYAGVAGDAATVN 662

Query: 585 DPWG-------------------NEQDPQILVNYT----SDPDLKAESSESYTAGLVYSP 621
           DP                      + D Q+    +    +   LK E+ +SY  GLVY P
Sbjct: 663 DPCNGYTGGSSVACANVPTDGSYQQSDGQVSGKVSGAAVAGYQLKPETGKSYDVGLVYDP 722

Query: 622 SYIDGMSLTLDYWRFKIKDAISRLDVQAGLNACHAGDTTA-CETFGITPDGNLENLTNPL 680
            +IDG+SL+ D+WR  ++D I+ +  Q  LN C+A   +A C       +G +  +  P 
Sbjct: 723 QWIDGLSLSADWWRIDLEDTITTVSAQTVLNQCYANSASAFCPLIHRNGNGTINYIAEPT 782

Query: 681 TNVGYQDTSGIDFNLAYRF-EGLGLDWSISNDLTYLLEFE--QDGIDYTGTIGGMFGGYA 737
            N+G     GIDFNL YR  E    + ++  + TYL  ++   D  D +       G Y 
Sbjct: 783 VNLGKLWAKGIDFNLTYRLPETAWGNVNVGLNGTYLTRYDVLPDTTDPSSVTIHNVGRYT 842

Query: 738 KVKNNF-------SVKAGQGDWSLMYSNRFIG-------EMDDINYGDT--------VDS 775
           +   NF       +V    GDWS  +  R++G       + D     D+        + +
Sbjct: 843 QAYGNFPRWRGLGTVSWALGDWSATWRIRYVGNTAIGNSDPDQSLSADSSQPTVVRKIGA 902

Query: 776 VLYHNISGMYHINDSITA-SLGVKNFTDEKPVMVASGN--EAGTVPEVYDTIGRQIYGGV 832
            +Y+N+   Y +    T   +GV N  D++P +  S N   A T    YD +GR  +   
Sbjct: 903 YVYNNLQLGYEVQPWHTRFEVGVDNIADKQPPLYYSNNVGNANTDVATYDLLGRFYWARA 962

Query: 833 TVKF 836
           TVKF
Sbjct: 963 TVKF 966