Pairwise Alignments

Query, 836 a.a., TonB-dependent receptor (RefSeq) from Shewanella loihica PV-4

Subject, 923 a.a., hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  385 bits (988), Expect = e-111
 Identities = 287/939 (30%), Positives = 431/939 (45%), Gaps = 138/939 (14%)

Query: 3   KTSRLAAAVKLSLIATVSTSGYFVANNAVAAEESASFERIAVTGSRIQRQDMETASPVTV 62
           K+++L  AV L+L+  V  +G  +A  A     + + ++I VTGSRI+  D+ET+ PV  
Sbjct: 4   KSNKLRDAVVLALVVGVGGTGTAIAQEA----GTTNLDKIEVTGSRIKSADIETSQPVLT 59

Query: 63  IDASAIRAEGYNSVDEILQAQPAMAGMAVGSTTNNGADGVAQVDLRGMGASRTLVLLNGR 122
           +    I  +G  SV ++LQ + A  G A+  T NNG DG + + LR +G++RTLVL+NGR
Sbjct: 60  LTRQDIDKQGVTSVADVLQ-RVAANGAALNRTFNNGGDGSSGIALRNLGSARTLVLVNGR 118

Query: 123 RMVNSGSGADSAVDLNTIPVAMIARVEILKDGASAVYGSDAIAGVVNIITKKDFEGFQLD 182
           R     +G D +VDLNTIP AM+ R++ILKDGAS +YGSDAIAGVVNIIT+K+F+G +  
Sbjct: 119 RWT---TGLDGSVDLNTIPTAMVERIDILKDGASTIYGSDAIAGVVNIITRKNFDGAEAG 175

Query: 183 INGGATDKGDGENVEISALYGFNTDGGNYTFGVAYSDRGGVMQKDRDWVEKG-------- 234
           +N G    GDG+        G  TD      G +Y     VM  DR+    G        
Sbjct: 176 VNVGQYSDGDGQRQAYDFTLGTTTDRATLMVGASYVKEDSVMAGDREISAGGPPFFSGQS 235

Query: 235 ----ASSFIPTGSLGGKVQDENGNWVDRTEGYDFTQDSWLQTPNERYSFFANATQEFANE 290
                 S++  GS    +      +V    GY+   D++L TP ER S F   +  F + 
Sbjct: 236 GTGFPGSYVRNGSRRILINGVETPYVANVHGYNTAPDNYLLTPQERTSLFTQGSFNFTDN 295

Query: 291 IVFTGDLLYTKRQSEQMMAAQPASVMLDVCTPTSTGNCITLTDEMVAGGITPDDQGRVEY 350
           + F  + +Y +R+SEQ++AA P            TG  +TL+ + +     P DQ     
Sbjct: 296 VTFRTEAMYNERKSEQLLAAMPV-----------TG--LTLSADSL---YNPFDQNLTSV 339

Query: 351 RRRTTDAGNRIYEQDTDTLRVSAGLAGEFD-VHTGIAWDLSYTYGKNKAETWVHNSINAK 409
            RR  + G R + Q+        GL G F+       WD+ Y Y K+      +   N  
Sbjct: 340 NRRFIETGGRSFNQNVKNWHFYGGLEGFFEFADRSFDWDVGYRYDKSDENVLTYGLFNLA 399

Query: 410 NM-----AQSVYDNQDAWFSG------------DPL------SQAIVDDISYLESTTGGN 446
           N+        + +      SG            +PL      +Q  +D  S+    +   
Sbjct: 400 NLNNAYGPSELRNGVPVCVSGPGGDVIPGCVPVNPLGPRGSITQDALDYTSFTAHDSSMV 459

Query: 447 EQHIVSGVISGEAFDLEAGPVAYAIGAEYRHDSGYYNPDPVIVAGEGTAAQQDPTDGSYS 506
           E    +  ISGE F L AGP+ +A G EYR +SG ++PD  I AG  T     PT GSYS
Sbjct: 460 ESKGYTANISGELFTLPAGPLGFAAGYEYRKESGQFDPDAFIAAGLSTGNGARPTAGSYS 519

Query: 507 VVSVYQEVSVPFTDKLTG------EFALRFDDYSTFGNASTWKIGLTYEATDDLMLRAVA 560
           +   Y E+SVP    L G        A R+ DYS FG+    K G  ++   DLM+R   
Sbjct: 520 LDEFYLELSVPVLADLPGAQLLDFSLATRYSDYSNFGDTVNNKFGFRWKPIQDLMIRGNY 579

Query: 561 ATGFRAPNVSELFGGNVGSYDYLDDPW----GNEQDPQILVN------------------ 598
           + GFRAP+++ LF GN  S++   DP     G   +P +  N                  
Sbjct: 580 SEGFRAPSINNLFAGNSDSFETYADPCSSQSGQLSNPVVAQNCAAAGVPANFVQPGAGNG 639

Query: 599 ---------YTSDPDLKAESSESYTAGLVYSPSYIDGMSLTLDYWRFKIKDAISRLDVQA 649
                    +TS+  L+ E+S S T G+V+SPS+  G++++LD+W+ +I++AI+R + Q 
Sbjct: 640 AKQTLEPFTWTSNDQLQPETSTSRTLGMVFSPSFAQGLNVSLDWWQIEIENAITRPESQF 699

Query: 650 GLNACHAGDTTACETFG--ITPDGN-------LENLTNPLTNVGYQDTSGIDFNLAYRFE 700
            L+ C+ G       +   +T D N       + N+  PL N+      G D  + YR  
Sbjct: 700 ILDKCYGGSAGEQAEYCALVTRDPNYADGAYTVTNINMPLLNLASYKVEGWDLAVNYRLP 759

Query: 701 GLGL-DWSISNDLTYLLEFEQDGI------DYTGTIGGMFGGYAKVKNNFSVKAGQGDWS 753
              +  ++IS D TYL  +E           + G        Y ++++N  V    GD+ 
Sbjct: 760 ETAIGQFTISWDSTYLSSWETKATADSELEQFQGRYLNQ-DPYWRIRSNLYVDWSLGDFG 818

Query: 754 LMYSNRFIGEM-----------------------DDINYGDTVDSVLYHNISGMYHINDS 790
           + +  R+   M                       D     + + +  YH+I   Y    +
Sbjct: 819 INWGLRYKSGMAEACPLSTALAQAYCSDPDRVTADGAEPRNHIGATTYHDIQVRYSTPWN 878

Query: 791 ITASLGVKNFTDEKPVMVASGNEAGTVPEVYDTIGRQIY 829
            T S+G+ N  D+ P  VA    A      YD  GR +Y
Sbjct: 879 ATVSVGLNNAFDKGP-PVAYSTSANRFDPQYDVPGRYMY 916