Pairwise Alignments

Query, 836 a.a., TonB-dependent receptor (RefSeq) from Shewanella loihica PV-4

Subject, 962 a.a., hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  280 bits (715), Expect = 4e-79
 Identities = 251/952 (26%), Positives = 409/952 (42%), Gaps = 160/952 (16%)

Query: 9   AAVKLSLIAT---VSTSGYFVAN-NAVAAEESASFERIAVTGSRIQRQDMETASPVTVID 64
           +AV+L L+     ++ +  F AN    +A  + + +RI +TGSRI+  D+ETA PV  + 
Sbjct: 6   SAVRLGLLPAGIAIALTPAFAANAQEQSAPSTTTLDRIEITGSRIRSVDVETAQPVFTVT 65

Query: 65  ASAIRAEGYNSVDEILQAQPAMAGMAVGST----TNNGADGVAQVDLRGMGASRTLVLLN 120
              I+  G  SV +ILQ   ++AG    S     T++   G   V+L  +G +RTLVL+N
Sbjct: 66  QQDIQKSGLVSVGDILQ-NLSIAGTQTYSKAAVLTSDPEQGGQYVNLYNLGENRTLVLVN 124

Query: 121 GRRMVNSGSGADSAVDLNTIPVAMIARVEILKDGASAVYGSDAIAGVVNIITKKDFEGFQ 180
           G+R  +S SG     D++TIP ++I R+E+LKDGASA+YGSDA+AGVVNII +++++G +
Sbjct: 125 GKRWTSSLSGL---TDMSTIPSSLIERIEVLKDGASAIYGSDAVAGVVNIILRQNYDGAE 181

Query: 181 LDINGGATDKGDGENVEISALYGFNTDGGNYTFGVAYSDRGGVMQKDR---------DWV 231
                G   +GDG   + S   G  TD  +  FG  Y++   V  KDR         + +
Sbjct: 182 ASAYFGQNGRGDGSKEQYSFTAGTTTDRSSLVFGANYTNEDPVWAKDRALTRYSAGPNHI 241

Query: 232 EKGASSFIP---------------TGSLGGKVQDENG-------NWVDRTEGYDFTQDSW 269
           E   S+  P               TGS  G+    +        N +   + Y+      
Sbjct: 242 EDSLSATGPWGRFTSNDQTYILNHTGSFDGRGVGADSRNIANYHNEITTDDYYNSVDQMM 301

Query: 270 LQTPNERYSFFANATQEFANEIVFTGDLLYTKRQSEQMMAAQPASVMLDVCTPTSTGNCI 329
           LQ  +   S F   +    + + F    +Y++R S + +A  P         P +     
Sbjct: 302 LQQSSRNKSIFTTGSYNLTDSLTFKSTAMYSERDSNRQIAGYPLQASSQPQFPVAISG-- 359

Query: 330 TLTDEMVAGGITPDDQGRVEYRRRTTDAGNRIYEQDTDTLRVSAGLAGEFDVHT-GIAWD 388
                       P  Q    + RRT +   R  E +  TL   A L G FDV + G  WD
Sbjct: 360 -------TSYYNPVGQDINSWFRRTVEL-PRTTESNVKTLHFDAALEGVFDVGSHGWNWD 411

Query: 389 LSYTYGKNKAETWVHNSIN----AKNMAQSVYDNQ---DAWFSGDPL------------- 428
           + + Y K         +IN     K +  S  + Q       +  PL             
Sbjct: 412 VGFNYNKYDVTQVSRGNINLLALQKALGPSFLNAQGQVQCGTAASPLPLGTSNALGQCTP 471

Query: 429 -------SQAIVDDISYLESTTGGNEQHIV---SGVISGEAFDLEAGPVAYAIGAEYRHD 478
                  S +  + + Y+ +     +Q +    +  I+G  FDL AG +  A G E+R  
Sbjct: 472 FNILGGPSASTPNALQYINALGQATQQSLSKQWTANITGGLFDLPAGELGLAAGVEHREI 531

Query: 479 SGYYNPDPVIVAGEGTAAQQDPTDGSYSVVSVYQEVSVPFTDKLTG------EFALRFDD 532
           SGY  PD +  AG  T      T+G Y     Y E+ +P    L G      + A R+ +
Sbjct: 532 SGYDYPDQLSSAGYTTDLAAQATEGRYQTNEAYLELLIPVLKDLPGAKELSFDVAARYSN 591

Query: 533 YSTFGNASTWKIGLTYEATDDLMLRAVAATGFRAPNVSELFGGNVGSYDYLDDP------ 586
           YS FG+ +  K   T++  DDL++R    TGFRAP +S+ FGG   ++D   DP      
Sbjct: 592 YSRFGDTTNSKFSFTWKPIDDLLVRGTYGTGFRAPTLSDTFGGGSQTFDTFTDPCDATFG 651

Query: 587 -WGN---------------------------EQDPQILVNYTS---DPDLKAESSESYTA 615
             GN                            +D Q    + S   + +L+ E S + T 
Sbjct: 652 SLGNAGVAARCAGEGLPAGFRQTDTAGNAVTRRDVQGNAPFNSGVGNAELEPEYSITRTV 711

Query: 616 GLVYSPSYIDGMSLTLDYWRFKIKDAISRLDVQAGLNACHAGDTTA-CETFG-ITPDGNL 673
           G+VYSP ++ G+  +LD++R  I + I+ L     LN C+     + C  +G     G +
Sbjct: 712 GMVYSPHWVQGLDFSLDWYRISISNIITSLTANDVLNNCYLNSLASYCADYGRDAVTGQV 771

Query: 674 ENLTNPLTNVGYQDTSGIDFNLAYRF-EGLGLDWSISNDLTYLLEFE---QDGIDYTGTI 729
             L+    N+G  +T G +F + YR  E     ++++ D  YL  ++   + G ++    
Sbjct: 772 TTLSRGNVNLGRLETEGYNFGVRYRMPETAYGKFAVNLDTNYLATYKSQAEAGAEWANAA 831

Query: 730 GGMFGGYAKVKN----NFSVKAGQGDWSLMYSNRFIG---------EMDDINY------- 769
           G  +  + +V+     ++S+ A   +W+L Y   F           E +D NY       
Sbjct: 832 G--YWNFPRVRATLGLDWSLGALSANWNLRYYGGFRDYCWDAAAGIECNDPNYQTPNPGW 889

Query: 770 -----GDTVDSVLYHNISGMYHINDSITASLGVKNFTDEKPVMVASGNEAGT 816
                 +   S+ Y ++S  +      + ++G +N  +++P +  S   + T
Sbjct: 890 GGGTGSNKKGSISYQDVSVTWQAPWDGSVTVGARNIWNKQPPVTYSITNSST 941