Pairwise Alignments

Query, 443 a.a., recombination factor protein RarA (RefSeq) from Shewanella loihica PV-4

Subject, 433 a.a., ATPase, AAA family from Caulobacter crescentus NA1000

 Score =  383 bits (983), Expect = e-111
 Identities = 202/414 (48%), Positives = 280/414 (67%), Gaps = 8/414 (1%)

Query: 14  PLAARMRPETLSQYIGQDHLLGEGKPLRQALEAGRAHSMMFWGPPGTGKTTLAELVAHYA 73
           PLA R+RP++L + +GQ HLLG   P+ +   A R  SM+ WGPPGTGKTT+A L+A   
Sbjct: 17  PLADRLRPQSLDEVVGQQHLLGPEGPIGRMAAARRLASMILWGPPGTGKTTIARLLAKAG 76

Query: 74  NAHVERISAVTSGVKEIRAAIEHAKSVAQSRGQRTLLFVDEVHRFNKSQQDAFLPFIEDG 133
                +ISAV SGV +++ A E A++  +  GQ TLLFVDE+HRFN++QQD FLPF+E+G
Sbjct: 77  GYEFMQISAVFSGVADLKKAFEQARA-RRMAGQSTLLFVDEIHRFNRAQQDGFLPFVEEG 135

Query: 134 TVIFIGATTENPSFEINNALLSRARVYLIKRLQDEEIIKIVRQALEDGERGLGKRQLKMP 193
            V  +GATTENPSFE+N ALLSR +V+++KRL  EE ++++ Q  E  E     R L + 
Sbjct: 136 IVTLVGATTENPSFELNGALLSRCQVFVLKRLT-EESLELLLQRAEAAEN----RPLPID 190

Query: 194 NEVAGKLASLCDGDARKALNLIELMSDMLPDGGEFNAQMLIEVAGQQLAGFDKNGDQYYD 253
            E    L ++ DGD R  L L E +  +  D    N   L +   ++   +DK+ +++Y+
Sbjct: 191 AEARSALVAMADGDGRYLLTLAETLFSIGTDT-PLNPTQLGQFLQKRRPAYDKDREEHYN 249

Query: 254 LISAVHKSIRGSAPDAALYWYCRMLEGGCDPLYVARRLLAIASEDIGNADPVAMSVAVNA 313
           LISA+HKS+RGS PDAALYW  RMLEGG DPL++ARRL+ +ASEDIG ADP+++ +   A
Sbjct: 250 LISALHKSVRGSDPDAALYWLARMLEGGEDPLFIARRLVRMASEDIGAADPLSLLLTTAA 309

Query: 314 WECFHRVGPAEGERAIAQAVVYLACAPKSNAVYTAFKAARQLARETGSQPVPNHLRNAPT 373
            + +  +G  EGE A+AQAVV++A APKSNAVYTA+KAAR+ A+ETGS   P+H+ NAPT
Sbjct: 310 KDAYDFLGSPEGELALAQAVVHMASAPKSNAVYTAYKAARRAAKETGSLMPPSHILNAPT 369

Query: 374 QLMADIGLGEGYRYAHDEPNHYASGECYFPEQLAGTQFYYPSEHGFEKRIKTKL 427
           +LM  +G G+GY Y HD      SG+ YFP+ +   +FY P   G E +++ +L
Sbjct: 370 KLMKSLGYGDGYAYDHDVEGG-VSGQNYFPDGMERRRFYEPKPVGAEAKVRERL 422