Pairwise Alignments

Query, 1060 a.a., acriflavin resistance protein (RefSeq) from Shewanella loihica PV-4

Subject, 1036 a.a., AcrB/AcrD/AcrF family protein from Vibrio cholerae E7946 ATCC 55056

 Score =  278 bits (712), Expect = 1e-78
 Identities = 243/1043 (23%), Positives = 477/1043 (45%), Gaps = 54/1043 (5%)

Query: 14   RNSVAANLLMIIIIIGGLLTASTIRKQFFPQTETNWVEFSAFYPGAAPQEVEEGITIKVE 73
            +  VAA +L +++ + G+++ + +  +  P  E+  V  S  Y GA+   +E  IT  +E
Sbjct: 9    KRPVAALVLSMLLCVFGVVSFTKLAVREMPDIESPVVSVSTRYQGASATIIESQITSVLE 68

Query: 74   EALERVQGLKRVITYSNRNSASGYFRIEDSYDPQVVLDEIKSEIDSIS-SFPDGMERPRV 132
            + L  + G+  + + S    +      E  YD    + +I+  +     S P+  + P+V
Sbjct: 69   DQLAGISGIDEITSVSRNGMSRITVTFELGYDLNTGVSDIRDAVARAQRSLPEEADDPQV 128

Query: 133  ERIKNR---QEVFYISLYG-DLPPKKLKEFGEKIH-DELMQLPLVNITEFYGGLDYEMSI 187
               KN    Q   YI+L   ++   +L ++ E++  D    +  V+  +  GGL   M +
Sbjct: 129  --FKNNGSGQASVYINLSSSEMDRTQLTDYIERVLLDRFSLISGVSSVDVSGGLYKVMYV 186

Query: 188  EVSKDKLREYNLSFNDVAKAVRGYSRNMSAGQIKAENGYISLRVQNQAYVGYEFENLPLI 247
             +  + +    ++ +D++ A+   +     GQ++ ++  +S+R         +FE L + 
Sbjct: 187  RIKPELMAGRGVATSDISDALNKENLESPGGQVRNDSTVMSVRTARGYQSAEDFEYLVVK 246

Query: 248  TLEDGTKLLLGDVANVVDGFEEGIQYSKFNGKNSVTFFVGASNDQSMTDVAKVVNQYVED 307
               DGT + L DVA+V  G E      K +G  +V+  +   +D +  +VAK V++ V+ 
Sbjct: 247  RASDGTPIYLKDVADVFIGAENENSTFKSDGIVNVSMGIVPQSDANPLEVAKRVHEEVDK 306

Query: 308  KQASLPQGLNLETWVDMTYYLQGRLDLMLDSMKSGAILVFIMLALFL-RVRLAFWVMMGL 366
             Q  LP+G  L    D T +++  +  +  ++     LV ++L +F+ ++R      + +
Sbjct: 307  VQQFLPKGTRLAIDYDSTVFIERSISEVYSTLFITGGLVILVLYIFIGQLRATLIPAVTV 366

Query: 367  PVCFLGTLLLMPTAMIDVTINVISLFAFILVLGIVVDDAIVMGESAHTECEEKGQSIDNV 426
            PV  +     M       +IN+I+L A IL +G+VVDDAIV+ E+     E   + +   
Sbjct: 367  PVSLISAF--MAAYYFGFSINLITLMALILSIGLVVDDAIVVVENIFHHIERGEKPLLAA 424

Query: 427  IRGVKKVAMPATFGVLTTIAAFLPITMDDGPSSAFGQSIGYVVILCLLFSLVESKLILPA 486
             +G ++V        L  +  FLPI+  DG           ++ + ++FS + +  + P 
Sbjct: 425  YKGTREVGFAVIATTLVLVMVFLPISFMDGMVGLLFTEFSVLLAMAVIFSSLIALTLTPV 484

Query: 487  HLAKMKHKTQVKPGSKNPINLLRIGVNYLQAKVDNGLQFVIYRLYKPSLTLSVKYRYMII 546
              +K+  K  VKPG  N +      ++ L A++++G + V+ R        ++++R+   
Sbjct: 485  LGSKLL-KANVKPGRFNQL------IDRLFARLESGYRQVVSR--------AIRWRWAAP 529

Query: 547  ALFISLILVCAGLYSGGILRYVGQPKIPHDFPRI--SVEMNLDSSEQATLSAALAIEAAL 604
             +    I  C G  S G+++ V     P +   +  S     D++    ++A + +    
Sbjct: 530  VV----IAACIG-GSYGLMQLVPAQLTPSEDRGVIFSFVRGADATSYNRMAANMDL---- 580

Query: 605  HKVDDQLEQEFGQRMIADMQVDLQ------GRTRAQVMTKLVTPELRPIDTFALAERWRA 658
              V+ +L    GQ  +    +         G     V+  L     R +       + R 
Sbjct: 581  --VEQRLMPLLGQGFLKSFSIQSPAFGGNAGDQTGFVIMILEDWNDRTVTAQEALSQVRK 638

Query: 659  AMPQIPGVKSFNIQDNLFGGGRDDGDISFRLEGKDEAQLIAAAKALK--AKLNSLQGVGD 716
            A+  IP V+ F       GG  +   + F L G D ++L   A+ L+  A+ +      D
Sbjct: 639  ALAGIPDVRVFPFMPGFRGGSNEP--VQFVLGGSDYSELKTWAEKLEEEAEKSPFMTGAD 696

Query: 717  VNDSRQSSAKEVQFSLKPLANSVGLTLADVASQVSASFYGLEAQRILRNGEEIKVMLRYP 776
            ++ S ++    V    K  A  +G+++  ++  +     G +    +  GEE  V LR  
Sbjct: 697  IDYSEKTPELVVTID-KQRAAELGISVKSISDTLEVMLGGKKVTTFVERGEEYDVYLRGD 755

Query: 777  EEQRNSIAHVTEVMILTTQGAEIPLSEVAEIQVTQGVSGIRRENGNRTINVWASVDASQA 836
            E   N+ A ++++ + T  G  + L  V  I        +   N  +++ + A+++A   
Sbjct: 756  ENSFNNAADLSQIYMRTATGELVTLDTVTRIDEVASAIRLAHYNKQKSVTITANLEAGYT 815

Query: 837  EPFKLAQDIRDNFIPELLRQYPRVKSEVAGNIQEQIDSANTQMRNFIISLLVIYSLLAVP 896
                 A D  D    E+L     +    +G  ++  ++ ++    F ++LLV Y +LA  
Sbjct: 816  --LGQALDFLDQKAQEILPN--DISVSYSGESKDFKENQSSVAIVFALALLVAYLVLAAQ 871

Query: 897  LKSYVQPMMIMSVIPFGIIGSVLGHMLLGIDLSALSLFGIIAAAGVVVNDSLVMVDYINR 956
             +S++ P+++M  +P G+ G  LG  ++G  ++  S  G+I   G+V  + +++V++ N+
Sbjct: 872  FESFINPLVVMLTVPMGVFGGFLGLFVMGQGMNIYSQIGMIMLIGMVTKNGILIVEFANQ 931

Query: 957  ARLAGISMKVAVIEAGCRRFRAILLTSLTTFIGLVPIMSETSMQAQMVIPMAVSLAFGVL 1016
             R  G+  + A+I+A  RR R IL+T+ TT  G +P++  T    +  I +   + FG+ 
Sbjct: 932  LRDRGVEFEKAIIDASARRLRPILMTAFTTLAGSIPLIVSTGAGYESRIAVGTVIFFGMG 991

Query: 1017 FATIVTLVLIPCLYVAIEDTKSA 1039
            FAT+VTL++IP +Y  I  +  A
Sbjct: 992  FATLVTLLVIPAMYRLISGSTQA 1014