Pairwise Alignments

Query, 478 a.a., glyceraldehyde-3-phosphate dehydrogenase (RefSeq) from Shewanella loihica PV-4

Subject, 336 a.a., glyceraldehyde 3-phosphate dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  202 bits (515), Expect = 1e-56
 Identities = 125/329 (37%), Positives = 184/329 (55%), Gaps = 11/329 (3%)

Query: 129 VVLYGFGRIGRLLARLLIERTGVSNKLRLRAIVLRGGRKGDLEKRASLLRRDSVHGPFNG 188
           V + G+GRIGR + R L E +  +  +++ AI       GD    A L + DSVHG FN 
Sbjct: 5   VAINGYGRIGRNVLRALYE-SEKAYPIKIVAI----NDLGDASINAHLTKYDSVHGRFNA 59

Query: 189 SVEVDEENNAIIANGTYIQVIYANSPDEVDYTRYGINNALVVDNTGIWKDEDGLGLHLRC 248
            VE D E  AI  NG  I       P ++ +    ++  +V + TGI+  ++ +  HL  
Sbjct: 60  KVEHDAE--AIYVNGDKILTFQERDPGKLPWNDLQVD--VVFECTGIFTSKESVQPHLAA 115

Query: 249 NGASKVLLTAPAKGAIKNIVYGVNENDILDEDTIVSAASCTTNAITPVLKAVNDKYGIVN 308
            GA KV+++AP K     +VYGVN N +  + T++S ASCTTN + P  K +ND+ GI +
Sbjct: 116 -GAKKVIISAPGKNVDATVVYGVNNNVLTSDMTVISNASCTTNCLAPFAKPLNDEIGIES 174

Query: 309 GHVETIHSYTNDQNLIDNYHKADRRGRSAPLNMVITETGAAKAVAKALPVLAGKLTGNAI 368
           G + TIH+YTNDQ L D YH   RR R+A L+M+ T+TGAA AV   +P L GK  G A+
Sbjct: 175 GLMTTIHAYTNDQRLSDVYHTDLRRARAAALSMIPTKTGAAAAVGLVVPELQGKFDGLAV 234

Query: 369 RVPTPNVSMAIISLNLNGETSKEDMNEYLRNVALCSELQNQVDFTESTEIVSSDLVGSRY 428
           RVPT NVS+  +S   + +T+ E++N  +   A  + L ++V       +VS D   + +
Sbjct: 235 RVPTVNVSLVDLSFIASRDTTVEEVNAIIERAASVAPL-SEVLAVNKEPLVSIDFNHNAF 293

Query: 429 AGVVDSQATIAEGNRAILYVWYDNEFGYS 457
           +   D+  T   G    +  WYDNE+G+S
Sbjct: 294 SSNFDATQTRVNGRLVKVMAWYDNEWGFS 322