Pairwise Alignments

Query, 230 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

Subject, 224 a.a., cytochrome biogenesis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  197 bits (501), Expect = 1e-55
 Identities = 96/218 (44%), Positives = 139/218 (63%), Gaps = 8/218 (3%)

Query: 8   GAFLVGLMGAGHCIGMCGGLVGAFSQQLPRKASDNILLGQLQFILSYNLGRILSYTLAGA 67
           GA++VGL+GAGHC+GMCGG+    +   P K+S  +LL        YNLGR+LSY L G 
Sbjct: 7   GAWVVGLLGAGHCLGMCGGISALLTLD-PSKSSPALLL-------YYNLGRLLSYALIGG 58

Query: 68  LVGGSASLLSTLFSIDAYLIGMRVFAGVMMIVTGLYIAQIWSGVVQIERVGKLLWRFIGP 127
           +VGG  + L+ L  + + L+ +R+FA V+MIV GLYI + W G++ +E+VG+ +WR+I P
Sbjct: 59  IVGGITASLTELIDVQSALVWLRIFAAVLMIVLGLYIGRWWFGLLWLEKVGQKIWRWISP 118

Query: 128 IANKWLPITDLKQAFTAGLLWGWLPCGLVYSTLTWAVAANSAQQGAMIMAAFGLGTLPAL 187
           +    LP+     A   GL+WGWLPCGLVYS LTW+  A S  QGA+IM +FG GTLPA+
Sbjct: 119 LGKTLLPLKKQWHALPFGLVWGWLPCGLVYSMLTWSAVAGSFSQGALIMLSFGFGTLPAM 178

Query: 188 VSVGIAARYFAQLVQARKVRLISGLILVSFGIHTLYIA 225
           ++ G  A        +   R  + ++++ +G+ T Y A
Sbjct: 179 LASGWGANKLMHWQNSHLFRQCAAILVIGYGLFTAYDA 216