Pairwise Alignments

Query, 800 a.a., putative ATP-dependent protease La-relatedprotein (RefSeq) from Shewanella loihica PV-4

Subject, 660 a.a., ATP-dependent protease-like (NCBI) from Rhodospirillum rubrum S1H

 Score =  367 bits (943), Expect = e-106
 Identities = 204/491 (41%), Positives = 304/491 (61%), Gaps = 5/491 (1%)

Query: 307 YQVNVLVNHGD-IPMPIVIEESPNYHNIFGYIENATYKGTIFSDFSLIRPGSLHKANGGV 365
           ++   LV+H      PI+ E++P    + G++E+    G      SLIRPG+L +ANGG 
Sbjct: 163 WRAEALVSHAPGAGAPIIREDNPTRAALSGWVEHVAAPGAPV--VSLIRPGALQRANGGF 220

Query: 366 LMIDAIKVLEQPYVWDGLKRALRSRKLSL-SSLEREVTLSGTISLDPEAIPLDVKIILFG 424
           L++DA KVL  P  W+ LK +LR  ++ + +  ER +      + +P  +PL +K++LFG
Sbjct: 221 LLLDAHKVLTTPGAWEDLKHSLRHGQIRVVTEAERALGAVAAPTPEPSPLPLALKVVLFG 280

Query: 425 DYQTYQLLQHYDPEFKELFRVTADFEDEMPRTDASEVQYAKFISSIVVGNKMLHCDRGAI 484
           +   Y  L   DPEF  LF+V ADF+D+M RT  + +  A+ ++       +   DRGA+
Sbjct: 281 EPDLYYDLWDSDPEFAALFKVAADFDDQMKRTPEAVLGLARVLAEGGRAEDLPPLDRGAV 340

Query: 485 KRIIEFSARQADAQNKLSLHSADIANLLRESNYVARTSKSNMIRAGHVEQALHNHELRVC 544
            RI++ + R A+  +KL+     + +L RE+ + AR   + +I   HVE+AL   E R  
Sbjct: 341 ARIVDRAVRLAEDTDKLTARMEPLIDLAREAGFFARQDGAGVIGRDHVERALTAQERREG 400

Query: 545 RLRDYVMQSFINGTTLIDTQDSVVGQINALSVVATSDHQFGAPSRITASVSLGEGAVFDI 604
           R+RD +++  ++GT  ++T  +VVGQIN L+V+      FG PSRIT +V +G G V DI
Sbjct: 401 RVRDLLLEEILDGTIRVETTGAVVGQINGLAVLDYGRASFGRPSRITCAVRVGRGEVTDI 460

Query: 605 ERKVELGGQIHSKGVMILTAYLATIFGQTDKIPLTTHLTFEQNYSGVDGDSASMAELCAI 664
           ER+V+LGG +HSKGV+IL+A+L+T F     + L   L FEQ+Y  VDGDSAS  EL A+
Sbjct: 461 EREVDLGGPLHSKGVLILSAFLSTRFSVDGLLNLAASLVFEQSYCEVDGDSASSPELYAL 520

Query: 665 VSAFAKVPLRQDVAITGSMNQFGQAQPIGGVNEKIEGFFDVCKIKGRHKGQGVIIPRTNV 724
           +SA A+ P+RQ +A+TGS++QFG  QPIGGVNEKIEGFF+VC  +G    QGV+IPR N+
Sbjct: 521 LSALAEAPIRQSLAVTGSVDQFGNIQPIGGVNEKIEGFFEVCAARGLTGDQGVLIPRANL 580

Query: 725 QNLMLRADIVDAVNKGEFSIWAIEHVDQAVEILTGIPAGERDFEFEDYPKESLYALADAR 784
           +NLMLR ++V+A + G F ++ I  VD+ + ILTG+  GER  +   +P+ SL      R
Sbjct: 581 RNLMLRDEVVEACDTGLFHVYPIATVDEGIAILTGLIPGERGRD-GGFPEGSLNRRVARR 639

Query: 785 LQKLRDHVKRT 795
           L+      + T
Sbjct: 640 LESFARRSRET 650



 Score = 62.4 bits (150), Expect = 8e-14
 Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 12/173 (6%)

Query: 1   MSISPLASDKLYRSSTLALLDPSIKSTKQLTPLNEIVGQERAQQAVEFAMSMKDKGYNIY 60
           M++SPL +  L R    A L    ++T  LT     +GQERA +AV FA++M   GYN++
Sbjct: 1   MTVSPLGAPALRRPCDPAGLP--FETTADLTAPKGPLGQERALEAVAFALAMAAPGYNLF 58

Query: 61  AIGRNGLGKRTM---VMRYLDRYDPNGHHQLFDWCYVVNFDDARTPKVLKLPRGQAQAFK 117
            +G  G GKR +   ++    R  P       DW  + +  D   P  L+LP G+A+ F 
Sbjct: 59  CMGPEGTGKRALTGALLAEAARQKPTPD----DWVILHDPADPLRPTPLRLPAGRAKGFL 114

Query: 118 ADIENLMKRLVK--ALPLAFDNELYYSRAEKLKAQLAD-KQESALGQITKEAA 167
           A ++ L        + P A D    ++    +    A   Q+SA G+I +  A
Sbjct: 115 AAVDALATDWTAEWSAPAAEDGGAAFADLPDVAPLFARLSQDSATGKIWRAEA 167