Pairwise Alignments

Query, 555 a.a., 30S ribosomal protein S1 (RefSeq) from Shewanella loihica PV-4

Subject, 556 a.a., 30S ribosomal protein S1 from Vibrio cholerae E7946 ATCC 55056

 Score =  922 bits (2383), Expect = 0.0
 Identities = 461/554 (83%), Positives = 507/554 (91%)

Query: 1   MTESFADLFEQSLQQLEFRPGSIVRGTVVSIQNGMVLVDAGLKSESPIPADQFKNAQGVL 60
           MTESFA LFE+ L + +F+ G+IV+GTVV+I+NG VLVDAGLKSES IPA+QFKNA G L
Sbjct: 1   MTESFAQLFEEFLNETQFQQGTIVKGTVVAIENGYVLVDAGLKSESAIPAEQFKNAAGEL 60

Query: 61  EIAVGDEVDVALDSVEDGFGETQLSREKAKRHEAWIVLEKAYEDAETVIGVINGKVKGGF 120
           E+ VG +VDVALD+VEDGFGETQLSREKAKRHEAWIVLEKAYE+A TVIG+INGKVKGGF
Sbjct: 61  EVQVGSQVDVALDAVEDGFGETQLSREKAKRHEAWIVLEKAYEEAATVIGIINGKVKGGF 120

Query: 121 TVELNGIRAFLPGSLVDVRPVRDTAHLENKELEFKVIKLDQKRNNVVVSRRAVIESESSA 180
           TVELNGIRAFLPGSLVDVRP+RDTAHLENKELEFKVIKLDQKRNNVVVSRRAVIESESS 
Sbjct: 121 TVELNGIRAFLPGSLVDVRPIRDTAHLENKELEFKVIKLDQKRNNVVVSRRAVIESESSV 180

Query: 181 ERDALLENLQEGQAVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240
           ERD LLE LQEG  VKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE
Sbjct: 181 ERDELLETLQEGTEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE 240

Query: 241 INVKVLKYDRERTRVSLGLKQLGEDPWLEISKRYPENTKLTGRVTNLTDYGCFVEIEEGV 300
           I VKVLK+DR+RTRVSLGLKQLGEDPW+ I+KRYPE  KL+GRVTNLTDYGCFVEIEEGV
Sbjct: 241 ILVKVLKFDRDRTRVSLGLKQLGEDPWVAIAKRYPEGHKLSGRVTNLTDYGCFVEIEEGV 300

Query: 301 EGLVHVSEMDWTNKNIHPSKVVNLGDEVEVLVLDIDEERRRISLGLKQCKTNPWDDFAER 360
           EGLVHVSEMDWTNKNIHPSKVVN+GDEVEV+VLDIDEERRRISLGLKQCK NPW  FAE 
Sbjct: 301 EGLVHVSEMDWTNKNIHPSKVVNVGDEVEVMVLDIDEERRRISLGLKQCKANPWQSFAEA 360

Query: 361 YAKGDKVTGKIKSITDFGIFIGLDGGIDGLVHLSDISWNGTGEEAVSDYKKGDEISAVVL 420
            AKGDKVTGKIKSITDFGIFIGL+GGIDGLVHLSDISWN  GEEAV ++KKGDEISAVVL
Sbjct: 361 QAKGDKVTGKIKSITDFGIFIGLEGGIDGLVHLSDISWNVPGEEAVREFKKGDEISAVVL 420

Query: 421 SVDPERERISLGVKQTEDDPFNAYLADKKKGAIVTGTVTAVDAKGVTIELAETVEGYLRV 480
           +VD ERERISLG+KQ E+DPFNAY++D KKGA+V GTVTAVDAKG TIEL + VEGY+R 
Sbjct: 421 AVDAERERISLGIKQMENDPFNAYVSDNKKGALVNGTVTAVDAKGATIELEDGVEGYIRA 480

Query: 481 SDISRERIEDASTVYSVGDTVESKFMGVDRKNRSISLSIRAKDEADEKEAMANLNKQDDV 540
           S++SR+RIEDAS + +VGD VE+KF GVDRKNR I+LSI+AKDEA+E+E MA LNKQD+ 
Sbjct: 481 SEVSRDRIEDASLILNVGDKVEAKFTGVDRKNRVINLSIKAKDEAEEQEVMATLNKQDEA 540

Query: 541 AMSNAMAEAFKAAR 554
           A  NAMA+AFKAA+
Sbjct: 541 AFGNAMADAFKAAK 554