Pairwise Alignments

Query, 555 a.a., 30S ribosomal protein S1 (RefSeq) from Shewanella loihica PV-4

Subject, 771 a.a., transcriptional accessory protein from Dechlorosoma suillum PS

 Score = 67.8 bits (164), Expect = 1e-15
 Identities = 32/76 (42%), Positives = 52/76 (68%), Gaps = 1/76 (1%)

Query: 186 LENLQEGQAVKGIVKNLTDYGAFVDLG-GVDGLLHITDMAWKRVKHPSEIVNVGDEINVK 244
           + +LQ G  ++G+V N+  +GAFVD+G   DGL+H++ ++ K VK P E+V  GD + VK
Sbjct: 650 MRDLQPGMILEGVVTNVAAFGAFVDIGVHQDGLVHVSALSTKFVKDPHEVVKAGDIVKVK 709

Query: 245 VLKYDRERTRVSLGLK 260
           VL+ D  R R++L ++
Sbjct: 710 VLEVDMARKRIALTMR 725



 Score = 51.6 bits (122), Expect = 1e-10
 Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 1/68 (1%)

Query: 280 LTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNLGDEVEVLVLDIDEER 339
           L G VTN+  +G FV+I    +GLVHVS +  T     P +VV  GD V+V VL++D  R
Sbjct: 659 LEGVVTNVAAFGAFVDIGVHQDGLVHVSALS-TKFVKDPHEVVKAGDIVKVKVLEVDMAR 717

Query: 340 RRISLGLK 347
           +RI+L ++
Sbjct: 718 KRIALTMR 725



 Score = 38.1 bits (87), Expect = 1e-06
 Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 3/73 (4%)

Query: 369 GKIKSITDFGIFIGLDGGIDGLVHLSDISWNGTGEEAVSDYKKGDEISAVVLSVDPERER 428
           G + ++  FG F+ +    DGLVH+S +S     ++     K GD +   VL VD  R+R
Sbjct: 661 GVVTNVAAFGAFVDIGVHQDGLVHVSALSTKFV-KDPHEVVKAGDIVKVKVLEVDMARKR 719

Query: 429 ISLGVKQTEDDPF 441
           I+L ++   DD F
Sbjct: 720 IALTMRL--DDAF 730