Pairwise Alignments

Query, 236 a.a., DNA replication initiation factor (RefSeq) from Shewanella loihica PV-4

Subject, 467 a.a., chromosomal replication initiator protein DnaA from Vibrio cholerae E7946 ATCC 55056

 Score = 73.2 bits (178), Expect = 9e-18
 Identities = 61/231 (26%), Positives = 100/231 (43%), Gaps = 20/231 (8%)

Query: 21  FNSYYPAAGNDELILSLQASAE-----GRANKAVYLWGPVKAGRTHLMHAT--CARANEL 73
           FN++     N    L L A+ +     G A   ++L+G    G+THL+HA       N  
Sbjct: 138 FNNFVEGKSNQ---LGLAAARQVSDNPGAAYNPLFLYGGTGLGKTHLLHAVGNAIVDNNP 194

Query: 74  NRSSFYLPL---------GIHASISTELLEGLEQLDLVCIDDVDAIAGHPLWEEALFDLY 124
           N    Y+            +  +   E       +D + IDD+   A     +E  F  +
Sbjct: 195 NAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALLIDDIQFFANKERSQEEFFHTF 254

Query: 125 NRVAEHKRCALVVSASATASDAGFALPDLVSRMQWGLTYQLQPMADEEKLAALQRRAAMR 184
           N + E  +  ++ S       +G     L SR  WGLT  ++P   E ++A L ++A   
Sbjct: 255 NALLEGNQQIILTSDRYPKEISGVE-DRLKSRFGWGLTVAIEPPELETRVAILMKKAEDH 313

Query: 185 GLQLPEDVGRFLLNRLARDLRTLFDVLDRLDKASLVHQRKLTIPFVKEMLR 235
            + LP++V  F+  RL  ++R L   L+R+   +    R +TI FV+E LR
Sbjct: 314 QIHLPDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPITIDFVREALR 364