Pairwise Alignments

Query, 185 a.a., TetR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

Subject, 205 a.a., transcriptional regulator, TetR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  140 bits (354), Expect = 1e-38
 Identities = 78/185 (42%), Positives = 110/185 (59%), Gaps = 6/185 (3%)

Query: 2   TDKRQLLIDTALSLFTERGINLVGINEVLKVSGVAKKTLYHHFSSKEALIVAVLETRHQI 61
           +DKRQ L+ TA  LF  + ++ VGIN++L+ S +AKKTLYHHF SK+ L+ AV+  R + 
Sbjct: 13  SDKRQQLVTTAFKLFYFQSVHGVGINQILQESAIAKKTLYHHFVSKDELVKAVVRYRDET 72

Query: 62  FIHWLEERLTPAQDDLGVIDALFSALDDWFNDRVPELSQFHGCLFINSAIECGDCRCQVS 121
           F  WL ER+  +      I  LF ALDDWFN RVP+L +F GC FIN + E  +    V 
Sbjct: 73  FYQWLSERVNASPAGREGIRGLFRALDDWFNQRVPQLCEFRGCFFINVSAEFTEPSHPVH 132

Query: 122 RFAKFHKQAVRDLIGKHL------HQPNEALVDLICLMKEGAIVSAMVSQDKGAALRSQS 175
           +    HKQ V  LI + +          + LV  I L+KEGAIVSA +  +  +AL + +
Sbjct: 133 QLCALHKQRVASLIERQVSALGLPEAKTQYLVAAIGLLKEGAIVSAQLKGETQSALLALA 192

Query: 176 LLQHL 180
           +++ L
Sbjct: 193 VVEQL 197