Pairwise Alignments

Query, 604 a.a., lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA (RefSeq) from Shewanella loihica PV-4

Subject, 768 a.a., Lipid A export ATP-binding/permease protein MsbA from Acidovorax sp. GW101-3H11

 Score =  316 bits (809), Expect = 3e-90
 Identities = 192/498 (38%), Positives = 286/498 (57%), Gaps = 8/498 (1%)

Query: 107 TYGISYISARMIMDMRQQVFEHYLRLPVSYIDAESSGNLISRVTFDTEQIARASGSALIT 166
           TY ++ +S R+  D+R   +EH LRL + Y   + +G+L++R+  +T++I        + 
Sbjct: 247 TYILALVSERIGADLRTTTYEHLLRLSLDYFGGKRTGDLMARIGSETDRINVFLSLHALD 306

Query: 167 IVRDGITVIGMLGVMF-YNSWKLSLCILIVGPLIGLVIAVVSRKFRKVSKQIQTAMGGVT 225
            V D + ++    ++F  N W L+L  L+  P IG +I  V  + R   ++I      VT
Sbjct: 307 FVTDVLMIMMTAAILFSINPW-LALVTLVPLPFIGWMIHTVRDRLRTGFEKIDRVWSEVT 365

Query: 226 SVTEQMIKGHKNVLVFGGQQAESQRFAKVNDDNRSRTMKLALAQAISQPLVMVIGSLALA 285
           +V    I G + V  F  ++ E+QRF   N  N     KL    ++  P V ++  + L 
Sbjct: 366 NVLADTIPGIRVVKAFAQEKREAQRFRDANQHNLEVNDKLNKTWSLFTPTVSLLTEIGLL 425

Query: 286 FVLYASSLESMRADLTAGTFATILAAMLAMLQPIKSLTRVNAEFQRGIAACSTIFAVLDT 345
            V         R  +T G     +A +      + S++R+ +  Q+  A    IF +LD 
Sbjct: 426 VVWAFGIWLVSRNQITVGVLTAFIAYIGRFYGRLDSMSRIVSVTQKAAAGAKRIFDILDH 485

Query: 346 PAEVDNGTFETK--RVEGRLSFDKVNFRYNNQEGLALKEVDFQVNPGETLALVGRSGSGK 403
            + V +     K  +V+G +S   V FRY ++    +K +   + PGE + LVG SGSGK
Sbjct: 486 VSNVPDPAQPVKVDKVQGAISMQGVGFRYGSRA--VIKGLHLDIRPGEMIGLVGHSGSGK 543

Query: 404 STIASLITRFYSDLDSGDIRLDDVSLRDYKLAALRRQVALVSQQVTLINDTIAANIAYAY 463
           ST+ +LI+RFY D+  G I++D + +R + +A  RR + LV Q+  L   TIA NIAY  
Sbjct: 544 STLVNLISRFY-DVSDGSIQVDGIDIRRFAVADYRRHIGLVLQEPFLFFGTIAENIAYGK 602

Query: 464 PGEVTEEQIIDAAKLANAWEFICNMPEGIYTQVGENGVMLSGGQRQRIAIARAILRDAPI 523
           P E T E+I+ AA+ A+A EFI  +P G  + VGE G  LSGG+RQRI+IARA+L D  I
Sbjct: 603 P-EATREEIVAAARAAHAHEFILRLPHGYDSLVGERGQGLSGGERQRISIARALLIDPRI 661

Query: 524 LILDEATSALDTESEKAIQTGLDNLRQNRTSIVIAHRLSTVENANQILVVDQGKVVERGT 583
           LILDEATSA+DTE+EK IQ  LDNL Q RT+I IAHRLST+  A++++V+D+G+VVE G 
Sbjct: 662 LILDEATSAVDTETEKEIQKALDNLVQGRTTIAIAHRLSTLRKADRLVVMDRGEVVEVGP 721

Query: 584 HSELLAKQGIYYNLYQMQ 601
           H EL+ KQG Y+ LY+ Q
Sbjct: 722 HDELMEKQGAYWRLYEAQ 739