Pairwise Alignments

Query, 604 a.a., lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA (RefSeq) from Shewanella loihica PV-4

Subject, 592 a.a., lipid A export ATP-binding/permease MsbA from Ralstonia solanacearum GMI1000

 Score =  420 bits (1080), Expect = e-122
 Identities = 230/611 (37%), Positives = 367/611 (60%), Gaps = 29/611 (4%)

Query: 1   MTNSSKSEVGSV-----FLRLLTYLVPLKGVLFLSVFGLVLYGLVDATFIYSIKPFIDQG 55
           +T+SS S+  +      F RL  YL P      L++  + +    +      +K  +DQG
Sbjct: 3   VTSSSSSQPPAASQPGHFKRLWAYLRPELSSFILAMVAMGVVAATEGIIPKVVKDLLDQG 62

Query: 56  FASNVPTTPGLVEGVDLGMGGGFNSDSDVLKTAPFVVIGLFTLRGLANFLSTYGISYISA 115
           F                  GG +   +  L   P +++G+  +RG+A F +TY +S +S 
Sbjct: 63  F------------------GGEY---AGKLWRVPAMLVGIAVVRGVAQFGATYFLSLVSN 101

Query: 116 RMIMDMRQQVFEHYLRLPVSYIDAESSGNLISRVTFDTEQIARASGSALITIVRDGITVI 175
           ++++++R ++FE  L+ P ++    ++ +LI+ V F+  Q+ +      IT+VRD +TV+
Sbjct: 102 KVLLNLRMKMFERLLQAPAAFYQRNTAASLINAVIFEVNQVLQVLTGVFITLVRDSMTVL 161

Query: 176 GMLGVMFYNSWKLSLCILIVGPLIGLVIAVVSRKFRKVSKQIQTAMGGVTSVTEQMIKGH 235
            +L  +FY +W+L+L + ++ P+IG +++ ++R+ R ++++ Q        V E+   G+
Sbjct: 162 ALLIFLFYTNWRLTLVVAVILPVIGFLMSRINRRLRSLNREHQNLTNEAAYVVEEAAGGY 221

Query: 236 KNVLVFGGQQAESQRFAKVNDDNRSRTMKLALAQAISQPLVMVIGSLALAFVLYASSLES 295
           K V + GG+  ES+RF  + +  R   M++A+A  ++QP+   + +LAL+ +L  + +++
Sbjct: 222 KVVKLHGGEAYESRRFNAMTNRLRGYAMRMAVAGGLNQPVTQFLAALALSVILAIAMVQA 281

Query: 296 MRADLTAGTFATILAAMLAMLQPIKSLTRVNAEFQRGIAACSTIFAVLDTPAEVDNGTFE 355
                T G F   + AML ++ P+K LT VN   QRG+ A   IF ++DTP E  +G   
Sbjct: 282 QANQTTVGGFTGFVMAMLLLISPLKHLTDVNQPMQRGLTAAEFIFGLIDTPIEPQDGGKH 341

Query: 356 TKRVEGRLSFDKVNFRYNNQEGLALKEVDFQVNPGETLALVGRSGSGKSTIASLITRFYS 415
             R  G L F+ V FRY      AL  +D  V  GE +ALVG SGSGK+T+ +L+ RF+ 
Sbjct: 342 IDRARGDLRFEHVTFRYGPDGRAALDSIDLHVKAGEIVALVGPSGSGKTTLVNLLPRFF- 400

Query: 416 DLDSGDIRLDDVSLRDYKLAALRRQVALVSQQVTLINDTIAANIAYAY--PGEVTEEQII 473
           +  SG I LD  +L D  L  LRRQ+A VSQ V L NDTIAAN+AY      E+   ++ 
Sbjct: 401 EPTSGRIVLDGDALADLSLQDLRRQIAFVSQDVVLFNDTIAANVAYGARDASEIDMARVR 460

Query: 474 DAAKLANAWEFICNMPEGIYTQVGENGVMLSGGQRQRIAIARAILRDAPILILDEATSAL 533
            A + A   + + N+P+G+ T +G+NG  LSGGQRQR+AIARA+ +DAPILILDEATSAL
Sbjct: 461 RALEAAYLTDVVDNLPDGVDTNIGDNGSKLSGGQRQRLAIARAVYKDAPILILDEATSAL 520

Query: 534 DTESEKAIQTGLDNLRQNRTSIVIAHRLSTVENANQILVVDQGKVVERGTHSELLAKQGI 593
           D+ESE+ +Q  L+ L Q RT++VIAHRLST+ENA++I+V++ G++VE GTH ELL + G+
Sbjct: 521 DSESERQVQAALEALMQGRTTLVIAHRLSTIENADRIVVLEHGQIVEAGTHRELLDRDGL 580

Query: 594 YYNLYQMQFGS 604
           Y  L+++QF +
Sbjct: 581 YAGLHRIQFAT 591