Pairwise Alignments

Query, 604 a.a., lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA (RefSeq) from Shewanella loihica PV-4

Subject, 574 a.a., lipid A export permease/ATP-binding protein MsbA from Ralstonia sp. UNC404CL21Col

 Score =  432 bits (1111), Expect = e-125
 Identities = 227/552 (41%), Positives = 349/552 (63%), Gaps = 11/552 (1%)

Query: 60  VPTTPGLVEGV-----DLGMGGGFNSDSDVLKTAPFVVIGLFTLRGLANFLSTYGISYIS 114
           V  T G++  V     D G GG +   +  L   P +++G+  +RG+A F STY +S +S
Sbjct: 26  VAATEGIIPKVVKDLLDQGFGGEY---AGKLWQVPAMLVGIAVVRGIAQFASTYLLSLVS 82

Query: 115 ARMIMDMRQQVFEHYLRLPVSYIDAESSGNLISRVTFDTEQIARASGSALITIVRDGITV 174
            ++++++R ++FE  L+ P SY    ++ ++I+ V F+  Q+ +      IT+VRD +TV
Sbjct: 83  NKVLLNLRMKMFERLLQAPASYYQRNTAASIINAVIFEVNQVLQVLTGVFITLVRDSMTV 142

Query: 175 IGMLGVMFYNSWKLSLCILIVGPLIGLVIAVVSRKFRKVSKQIQTAMGGVTSVTEQMIKG 234
           + +L  +FY +W+L+L + ++ P+IGL+++ ++R+ R ++++ Q        V E+ + G
Sbjct: 143 LALLVFLFYTNWRLTLVVAVILPIIGLLMSRINRRLRSLNRESQNLTNQAAYVVEEAVGG 202

Query: 235 HKNVLVFGGQQAESQRFAKVNDDNRSRTMKLALAQAISQPLVMVIGSLALAFVLYASSLE 294
           +K V + GG+  ES RF  + +  R   M++A+A  ++QP+   + +LAL+ +L  + L+
Sbjct: 203 YKVVKLHGGEAYESLRFNAMTNRLRGYAMRVAVAGGLNQPVTQFLAALALSVILAIAMLQ 262

Query: 295 SMRADLTAGTFATILAAMLAMLQPIKSLTRVNAEFQRGIAACSTIFAVLDTPAEVDNGTF 354
           +     T G F   + AML ++ P+K LT VN   QRG+ A   IF ++DTP E   G  
Sbjct: 263 AQANQTTVGGFTGFVMAMLLLISPLKHLTDVNQPLQRGLTAAEFIFGLIDTPIEPQEGGK 322

Query: 355 ETKRVEGRLSFDKVNFRYNNQEGLALKEVDFQVNPGETLALVGRSGSGKSTIASLITRFY 414
           +  R  G + FD V FRY      AL  V+  V PGE +ALVG SGSGK+T+ +L+ RF+
Sbjct: 323 KIDRARGDVRFDNVTFRYGEDGRAALDNVNLHVKPGEVVALVGPSGSGKTTLVNLLPRFF 382

Query: 415 SDLDSGDIRLDDVSLRDYKLAALRRQVALVSQQVTLINDTIAANIAYAY--PGEVTEEQI 472
            D  SG I LD  +L D  L  LRRQ+A VSQ V L NDTIAAN+AY      E+   ++
Sbjct: 383 -DPTSGTISLDGDALADLALHDLRRQIAFVSQDVVLFNDTIAANVAYGARDASEIDMARV 441

Query: 473 IDAAKLANAWEFICNMPEGIYTQVGENGVMLSGGQRQRIAIARAILRDAPILILDEATSA 532
             A + A   + + N+PEGI T +G+NG  LSGGQRQR+AIARAI +DAPILILDEATSA
Sbjct: 442 RRALEAAYLTDVVDNLPEGIDTNIGDNGSKLSGGQRQRLAIARAIYKDAPILILDEATSA 501

Query: 533 LDTESEKAIQTGLDNLRQNRTSIVIAHRLSTVENANQILVVDQGKVVERGTHSELLAKQG 592
           LD+ESE+ +Q  L+ L + RT++VIAHRLST+ENA++I+V++ GK+ E GTH EL+ + G
Sbjct: 502 LDSESERQVQAALERLMEGRTTLVIAHRLSTIENADRIIVLEHGKIAEAGTHRELIERDG 561

Query: 593 IYYNLYQMQFGS 604
           +Y  L+++QF +
Sbjct: 562 LYAGLHRIQFAT 573