Pairwise Alignments

Query, 301 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

Subject, 307 a.a., ABC-type multidrug transport system, ATPase component from Pseudomonas stutzeri RCH2

 Score =  147 bits (370), Expect = 4e-40
 Identities = 87/299 (29%), Positives = 155/299 (51%), Gaps = 4/299 (1%)

Query: 3   LITCKALSKQFGSKRALNDINLELSAGQPIALVGPNGAGKTTLFSLLCGYIRPTEGAVEI 62
           +I    L+K+F    A++D++ ++  G+ +  +GPNGAGK+T   +L G++ PT G   I
Sbjct: 1   MIEISNLTKRFAQHTAVDDLSFQVQRGEVLGFLGPNGAGKSTTMKMLTGFLAPTSGTASI 60

Query: 63  LGHAPGSTALLGK--VAALPQDARLDPNLTIAAQLELFAQLQGFNAASARRECQRVLALV 120
           LGH   +  L  +  +  LP+ A    ++T+ + LE  A+++GF  A  R+  +  +A V
Sbjct: 61  LGHDIQTQRLQAQRQIGYLPEGAPCYGDMTVRSFLEFIAEVRGFRGADKRQRVEAAVAQV 120

Query: 121 DLAEVAAQKPSSLSHGMSKRVSIAQALIGSPELVLLDEPTAGLDPANAKAIRELVRAQIG 180
           +L  V  Q   +LS G  +RV +AQA++  P++++LDEPT GLDP     +R+L++    
Sbjct: 121 ELENVLGQSIETLSKGFKRRVGLAQAILHDPKVLILDEPTDGLDPNQKHQVRQLIQGLAQ 180

Query: 181 KTTFVISSHNLAELEKLCDKVLYLDKG-VLNQSISIQDELADEYLTLTMQSCDDEALMAA 239
               +IS+H L E+  +C + + +  G ++     ++ E   +Y        D      A
Sbjct: 181 DKIVIISTHILEEVSAVCTRAVVIAHGRLVADGTPLELESRSKYHQAVTLVSDGPLDDVA 240

Query: 240 LEALPQVISVKSSQSKEFVIHYQVTASFALETELFALFNRQDWRYRAIQRGRTLEDKLF 298
           L ALP V  V+ ++ +E  +         +  ++ AL  +Q W  R +   R   D++F
Sbjct: 241 LAALPGVAGVERNE-REHSLTVLAQPGQVIFPQVNALITQQGWVVRELDVERGRLDEVF 298