Pairwise Alignments

Query, 301 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

Subject, 581 a.a., ABC transporter ATP-binding protein from Rahnella sp. WP5

 Score =  120 bits (301), Expect = 8e-32
 Identities = 75/251 (29%), Positives = 132/251 (52%), Gaps = 7/251 (2%)

Query: 3   LITCKALSKQFGS--KRALNDINLELSAGQPIALVGPNGAGKTTLFSLLCGYIRPTEGAV 60
           +I  + L K F    K A+  +  E+  G+   LVGP+GAGKTTL  +L G ++P+ G+ 
Sbjct: 8   IIRLQGLMKNFPELGKPAVASLECEIHPGEVTGLVGPDGAGKTTLIRMLAGLMKPSGGSA 67

Query: 61  EILGHAP--GSTALLGKVAALPQDARLDPNLTIAAQLELFAQLQGFNAASARRECQRVLA 118
           +++G  P    +AL   V  +PQ   L  +LT+   L L+A L+G  A   ++   R+L 
Sbjct: 68  QVIGLDPIKDGSALHAVVGYMPQKFGLYEDLTVMENLTLYADLRGVTAEERKKTFARLLE 127

Query: 119 LVDLAEVAAQKPSSLSHGMSKRVSIAQALIGSPELVLLDEPTAGLDPANAKAIRELVRAQ 178
              LA   ++    LS GM +++ +A  L+G P+++LLDEP  G+DP + + + ++V   
Sbjct: 128 FTSLAPFTSRLAGKLSGGMKQKLGLACTLVGQPKVLLLDEPGVGVDPISRRELWQMVHEL 187

Query: 179 IGKTTFVISSHNLAELEKLCDKVLYLDKGVL---NQSISIQDELADEYLTLTMQSCDDEA 235
            G+   ++ S +  +  + C +VL L++G L        +  ++A   L ++    ++  
Sbjct: 188 AGEGMLILWSTSYLDEAEQCREVLLLNEGELLYHGAPKELTQKMAGRSLLVSHGGENNRK 247

Query: 236 LMAALEALPQV 246
           L+     LPQV
Sbjct: 248 LLQRALKLPQV 258



 Score =  106 bits (265), Expect = 1e-27
 Identities = 70/242 (28%), Positives = 120/242 (49%), Gaps = 12/242 (4%)

Query: 3   LITCKALSKQFGSKRALNDINLELSAGQPIALVGPNGAGKTTLFSLLCGYIRPTEGAVEI 62
           +I  K L+K+FG   A + +N  +  G+   L+GPNGAGK+T F L+CG + PT G   +
Sbjct: 332 VIEAKQLTKKFGDFTATDQVNFTVQRGEIFGLLGPNGAGKSTTFKLMCGLLVPTSGKALV 391

Query: 63  LGH--APGSTALLGKVAALPQDARLDPNLTIAAQLELFAQLQGFNAASARRECQRVLALV 120
           L       S      +  + Q   L  NLT+A  L  F+ + G +  +   +  R+    
Sbjct: 392 LDMDLKTSSGKARQHLGYMAQKFSLYGNLTVAQNLRFFSGVYGLHGKAQDDKISRMSEAF 451

Query: 121 DLAEVAAQKPSSLSHGMSKRVSIAQALIGSPELVLLDEPTAGLDPANAKAIRELVRAQIG 180
           +L  +      SL  G  +R+++A +L+  P+++ LDEPT+G+DP   +     +   + 
Sbjct: 452 NLQPIFNSPTDSLPLGFKQRLALACSLMHEPDILFLDEPTSGVDPITRREFWMHINDMVE 511

Query: 181 K-TTFVISSHNLAELEKLCDKVLYLDKGVLNQSISIQDELADEYLTLTMQSCDDEALMAA 239
           K  T ++++H + E E  CD++  + +G L  S +  D        L  Q+ DDE +   
Sbjct: 512 KGVTVMVTTHFMDEAE-YCDRIGLVYRGKLIASGTPDD--------LKQQAADDEQVDPT 562

Query: 240 LE 241
           +E
Sbjct: 563 ME 564