Pairwise Alignments

Query, 301 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

Subject, 308 a.a., ATP-binding component of a transport system from Marinobacter adhaerens HP15

 Score =  120 bits (302), Expect = 3e-32
 Identities = 76/251 (30%), Positives = 129/251 (51%), Gaps = 7/251 (2%)

Query: 3   LITCKALSKQFGSKRALNDINLELSAGQPIALVGPNGAGKTTLFSLLCGYIRPTEGAVEI 62
           +I  + LS+ FG  RA+  ++LE+  G+    +GPNG+GKTT   +L G ++P+ G  E+
Sbjct: 5   VIRAEGLSRNFGDTRAVQSLDLEVERGRIYGFLGPNGSGKTTAIRMLIGLLKPSSGTAEV 64

Query: 63  LGHA--PGSTALLGKVAALPQDARLDPNLTIAAQLELFAQLQGFNAASARRECQRVLALV 120
           LG+    G+  L  ++  + Q   L  +LT+   L   A +   +A   R   + +L + 
Sbjct: 65  LGYGLPAGAEKLRRRIGYMTQKFSLYDDLTVQENLRFIASIYSLSANQLRSRVEDLLVIY 124

Query: 121 DLAEVAAQKPSSLSHGMSKRVSIAQALIGSPELVLLDEPTAGLDPANAKAI-RELVRAQI 179
            L +   Q   S+S G  +R+S+A A +  P+L+ LDEPT+ +DP + +    +L     
Sbjct: 125 GLRDSRHQLAGSMSGGQRQRLSLAAATLHKPDLLFLDEPTSAVDPQSRRDFWEQLFDLSD 184

Query: 180 GKTTFVISSHNLAELEKLCDKVLYLDKGVLNQSISIQDELADEY--LTLTMQSCDDEALM 237
             TT ++S+H + E E+ C K+  L+ G+  ++    DEL        + + S +   L 
Sbjct: 185 AGTTIMVSTHYMDEAER-CHKLAILETGI-KRADGAPDELMKNMGARVVEVSSANLRVLK 242

Query: 238 AALEALPQVIS 248
             L  LP VIS
Sbjct: 243 HRLLELPDVIS 253