Pairwise Alignments

Query, 301 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

Subject, 247 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  122 bits (307), Expect = 6e-33
 Identities = 75/232 (32%), Positives = 122/232 (52%), Gaps = 10/232 (4%)

Query: 2   KLITCKALSKQFGSKRALNDINLELSAGQPIALVGPNGAGKTTLFSLLCGYIRPTEGAVE 61
           ++I    L+KQ+G   A++ I L +  G+   L+GPNGAGK+T   ++ G   PT G VE
Sbjct: 4   QVIVLTELTKQYGKFTAVDHIRLSIRKGEIFGLLGPNGAGKSTTILMMMGLTEPTSGIVE 63

Query: 62  ILG--HAPGSTALLGKVAALPQDARLDPNLTIAAQLELFAQLQGFNAASARRECQRVLAL 119
           I G         +  K+  LP+D     ++T    L   A+L G     A+ +   ++  
Sbjct: 64  ICGINSTTHPIEVKRKIGYLPEDVGFYDDMTGLENLMYTARLNGIPDKEAKVKALELMKR 123

Query: 120 VDLAEVAAQKPSSLSHGMSKRVSIAQALIGSPELVLLDEPTAGLDPANAKAIRELVR--A 177
           V L +   +K    S GM +R+ +A  LI +PE+++LDEPT+G+DPA  +   EL+R  +
Sbjct: 124 VGLEDQLKKKTGKYSRGMRQRLGLADVLIKNPEIIILDEPTSGIDPAGVQEFIELIRWLS 183

Query: 178 QIGKTTFVISSHNLAELEKLCDKVLYLDKGVLNQSISI------QDELADEY 223
           +    T + SSH+L + +K+CD+V     G +   I +      + EL+D Y
Sbjct: 184 KEEGLTVLFSSHHLDQAQKVCDRVGLFSNGKILALIDMAELKEKKQELSDIY 235