Pairwise Alignments

Query, 301 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

Subject, 302 a.a., ABC transporter related (RefSeq) from Shewanella sp. ANA-3

 Score =  373 bits (957), Expect = e-108
 Identities = 197/302 (65%), Positives = 232/302 (76%), Gaps = 3/302 (0%)

Query: 1   MKLITCKALSKQFGSKRALNDINLELSAGQPIALVGPNGAGKTTLFSLLCGYIRPTEGAV 60
           M LI C+ LSK +GSK+ALN++NL L AG PIALVGPNGAGKTTLFSLLCGY+ P+ G V
Sbjct: 1   MILIQCQGLSKHYGSKKALNNVNLTLEAGAPIALVGPNGAGKTTLFSLLCGYLTPSAGTV 60

Query: 61  EILGHAPGSTALLGKVAALPQDARLDPNLTIAAQLELFAQLQGFNAASARRECQRVLALV 120
            ILG AP S ALLG++AALPQDA LDPNLTI +QL  FA++QG ++  A +E  RVL LV
Sbjct: 61  RILGEAPNSPALLGQIAALPQDATLDPNLTIISQLSFFARIQGMDSKQANQEALRVLNLV 120

Query: 121 DLAEVAAQKPSSLSHGMSKRVSIAQALIGSPELVLLDEPTAGLDPANAKAIRELVRAQIG 180
           DLAEVA QKP SLSHGMSKRV+IAQALIGSP+LVLLDEPTAGLDPANAK IRELVR    
Sbjct: 121 DLAEVAQQKPPSLSHGMSKRVAIAQALIGSPKLVLLDEPTAGLDPANAKKIRELVRTLSP 180

Query: 181 KTTFVISSHNLAELEKLCDKVLYLDKGVLNQSISIQ-DELADEYLTLTMQSCDDEALMAA 239
             TFVISSHNL ELEKLCD+VLYLDKG L QSIS++      +YLTLTM+ CD E L+ A
Sbjct: 181 SITFVISSHNLDELEKLCDQVLYLDKGELGQSISMRSSNSGSDYLTLTMEHCDSEMLIQA 240

Query: 240 LEALPQVISVKSSQSKEFVIHYQVTAS--FALETELFALFNRQDWRYRAIQRGRTLEDKL 297
           +  +P V+++ S Q+  FVI    TA+  +  ET L ALF  Q W+Y+ + +GRTLED L
Sbjct: 241 VGQIPGVVNITSKQAHVFVIQLNDTANRHYEFETALLALFKLQHWQYKMLLKGRTLEDTL 300

Query: 298 FS 299
           FS
Sbjct: 301 FS 302