Pairwise Alignments

Query, 313 a.a., ribosomal biogenesis GTPase (RefSeq) from Shewanella loihica PV-4

Subject, 314 a.a., ribosome biogenesis GTPase YlqF from Vibrio cholerae E7946 ATCC 55056

 Score =  420 bits (1080), Expect = e-122
 Identities = 204/305 (66%), Positives = 251/305 (82%), Gaps = 1/305 (0%)

Query: 2   AIQWFPGHMHKARKEIAEVMPQVDLVIEVLDARIPYSSENPMVTSLRGNRPCIKLLNKSD 61
           +IQWFPGHMHKARKEI E +PQVD++IEVLDARIP+SSENP+++ +RG +PC+K+LNK D
Sbjct: 5   SIQWFPGHMHKARKEIEEAIPQVDVIIEVLDARIPFSSENPLISHIRGEKPCVKVLNKRD 64

Query: 62  LADPEITQRWIDYLEQEQGVKAMAITTLQAAQVRKVPELCRKLVPSRDKIEKDIRTMIMG 121
           LADPE+T+ WI +LEQE+GVKAMAITT    +V K+ ELCRKL P R++I K+IRTMIMG
Sbjct: 65  LADPELTELWIAHLEQEKGVKAMAITTSNPQEVHKILELCRKLAPQREEIGKNIRTMIMG 124

Query: 122 IPNVGKSTIINTLAGRVIAKTGNEPAVTKTQQRINLKNGIVLSDTPGILWPKVDNEASGY 181
           IPNVGKSTIINTLAGR IA+TGN+PAVT+ QQRINL+NGIVLSDTPGILWPKV+N  SG+
Sbjct: 125 IPNVGKSTIINTLAGRAIAQTGNQPAVTRRQQRINLQNGIVLSDTPGILWPKVENPHSGF 184

Query: 182 RLAVTGAIKDTAMEYEDVAMFAAEYFLKAYPDAMLERYKLKELPNDDIGLLEAIGRKRGA 241
           RLA TGA+KDTAMEY++VA +  EY  K YP+ + ERY++ ELP  D+ L+E IGRKRGA
Sbjct: 185 RLAATGAVKDTAMEYDEVAFYTVEYLAKHYPERLKERYQIDELPETDVELMEEIGRKRGA 244

Query: 242 LRPGGRIDLHKASELLLHEFRSGKIGQLSLETPEMAEAEKAEVARILAEKEAEKQAKIEA 301
           LR G R+DLHKASE+LLHE R G +GQ++LE PEM   E  +V  I    +AE++AK + 
Sbjct: 245 LRAGARVDLHKASEILLHELRQGVLGQITLERPEMITEELQQV-EIDEALKAEEKAKRKE 303

Query: 302 ERLKR 306
           ER KR
Sbjct: 304 ERRKR 308