Pairwise Alignments

Query, 304 a.a., DNA polymerase III, delta prime subunit (RefSeq) from Shewanella loihica PV-4

Subject, 328 a.a., DNA polymerase III, delta' subunit from Pseudomonas stutzeri RCH2

 Score =  142 bits (359), Expect = 8e-39
 Identities = 83/176 (47%), Positives = 102/176 (57%), Gaps = 5/176 (2%)

Query: 3   LPWLTPVCEAFCSQLISGQQGHAYLLGIHQGYGGMQLANTLAQASLCMAPRAIGACGVCK 62
           LPW   +      +    Q  HAYLL    G G   LA  L    LC  P    ACGVCK
Sbjct: 5   LPWQAELWRQLAGR---SQHAHAYLLHGPGGIGKRLLAEQLMALLLCQRPVNGMACGVCK 61

Query: 63  SCQLFIAGNHPDCYQLEAD--GNQIKVDQVRELCQKLTATAQQGGRRVAVIKNCERLNTA 120
           +CQL  A  HPD Y LE +     I+VDQVR+L   +T TAQ GGR+V +++  E +N  
Sbjct: 62  ACQLLAAQTHPDHYILEPEEVDKAIRVDQVRDLVGFVTQTAQLGGRKVILLEPAEAMNLN 121

Query: 121 AANALLKTLEEPGRETLLLLQSDTPSRLMATISSRCQRLHCQLPSREAVQEWLAAQ 176
           AANALLK+LEEP  +T+LLL S  PSRL+ TI SRC +  C LP R+   +WLA Q
Sbjct: 122 AANALLKSLEEPSGDTVLLLISHQPSRLLPTIKSRCVQQACPLPGRQQSLDWLAGQ 177