Pairwise Alignments

Query, 304 a.a., DNA polymerase III, delta prime subunit (RefSeq) from Shewanella loihica PV-4

Subject, 329 a.a., DNA polymerase III subunit delta' from Pantoea sp. MT58

 Score =  117 bits (292), Expect = 5e-31
 Identities = 74/210 (35%), Positives = 104/210 (49%), Gaps = 8/210 (3%)

Query: 4   PWLTPVCEAFCSQLISGQQGHAYLLGIHQGYGGMQLANTLAQASLCMAPRAIGACGVCKS 63
           PWL        SQ    +  HA ++    G G   L   +++  +C     + +CG C  
Sbjct: 5   PWLNQPYRQVISQHQENRAHHALMIQAMAGMGDEALVWGMSRWLMCQQRDGLKSCGECHG 64

Query: 64  CQLFIAGNHPDCYQLEADGNQ--IKVDQVRELCQKLTATAQQGGRRVAVIKNCERLNTAA 121
           CQL  A  HPD Y+LEA+  +  + +D VR++ +K+    QQGG +V  + +  +L+ AA
Sbjct: 65  CQLMQANTHPDWYRLEAEKGKSTLGIDAVRQVTEKMYHFGQQGGAKVVWLPDAAQLSEAA 124

Query: 122 ANALLKTLEEPGRETLLLLQSDTPSRLMATISSRCQRLHCQLPSREAVQEWLAAQFSLTS 181
           ANALLKTLEEP   +   L S  PSRL+AT+ SRC  LH   P       WL  Q S   
Sbjct: 125 ANALLKTLEEPPANSWFFLSSRDPSRLLATLRSRCMTLHLTPPDEGQSLLWLKKQSS--H 182

Query: 182 DVTWCLPVV----GGPVDLLTALNDGRYEA 207
           D    L  +    G P   L+ L  G ++A
Sbjct: 183 DEQMLLAALRLGAGAPGAALSLLETGPWQA 212