Pairwise Alignments

Query, 609 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

Subject, 617 a.a., ABC transporter, transmembrane region:ABC transporter from Pseudomonas syringae pv. syringae B728a

 Score =  641 bits (1653), Expect = 0.0
 Identities = 325/607 (53%), Positives = 440/607 (72%)

Query: 1   MFKRFESWVSALPDQEAVQPPRGIYRFCRHYTRGFELPLALMSILTALLAILEVSLFAFM 60
           M + FE W+   P  E   PP G+ RF    TRG    +   ++L A ++I E  LF+F+
Sbjct: 1   MLRAFEKWLDPFPPDEVPPPPDGLARFLWACTRGARGYILAFALLCAGVSIYEAWLFSFL 60

Query: 61  GDLVDLLASHSPETLFAEQGDKLLLMAVLVLVVIPVLVLLHALVIYQGLLGNYPMSIRWL 120
           G +V+LL++       A Q   +L    LVL+   VLV L  +V +Q L  N P+ +RW 
Sbjct: 61  GQVVELLSTWKAGGDTAAQESSVLWGIGLVLLSSIVLVALRTMVQHQVLAINLPLRLRWD 120

Query: 121 AHRYLLKQSIAFYQNDFAGRIATKVMQTSLAVRETVTKLLDVLVYILVYFLSMLVIIADA 180
            HR +L+QS++F+ ++F+GR+ TKVMQT+L+VRE +  ++++++ I VYF++++ +    
Sbjct: 121 FHRLMLRQSLSFFSDEFSGRVTTKVMQTALSVREVLFTIVEIVLGIGVYFIAIIALAGGF 180

Query: 181 DLRLMLPMLVWLMIYVGLQFYYLPKLKQVSTEQADARSTMTGRIVDSYTNIATVKLFSHT 240
           DL+LMLP L WLM++     Y++P+L +V  EQA+ARS+MTGR+ D+YTNI TVKLFSH+
Sbjct: 181 DLKLMLPFLGWLMLFGLAMLYFVPRLGKVGQEQANARSSMTGRVSDAYTNITTVKLFSHS 240

Query: 241 QKEAQYAKESMTGFLDTVYRQMRLVTGINVSVQVINYLLAFSVAAVSIWLWRDNAITIGA 300
           ++EA +A+ +M  F  T   QMRLV+   +  Q +   L  S    ++WLW    +  GA
Sbjct: 241 KREAHFARAAMEDFKLTGLAQMRLVSQFEIVNQALVVALIMSAGGYALWLWHQGQVGTGA 300

Query: 301 IAVAVSLSLRLNGMSQWIMWEISSLFENIGTVADGMNTLSRPTSVQDSDNASQLTVSKGE 360
           +A   +++LR+NGMS WIMW+++SLFENIGTV DGM TL+R   V+D+ +A  L    G 
Sbjct: 301 VAAITAMALRINGMSHWIMWQMTSLFENIGTVQDGMETLTRGPKVEDAPDAKALVTRGGA 360

Query: 361 IAFNRVSFHYGEASGVIEDLDLKIKPGEKVGLVGRSGAGKSTLVNLLMRFHDVEQGSITI 420
           + F+ VSF+Y     V++ L L I+PGEK+GLVGRSGAGKSTL+NLL+RF+DV++GSI+I
Sbjct: 361 VTFDNVSFNYNGERQVLDALSLSIRPGEKIGLVGRSGAGKSTLINLLLRFYDVDKGSISI 420

Query: 421 DGQNIREVEQDSLRANIGMVTQDTSLLHRSIRDNIRYGKPDASEEELENAIRQAQAYEFI 480
           DGQ+I  V QDSLR+ IGMVTQDTSLLHRSIRDNI YG+PDA++E++ +A   AQA  FI
Sbjct: 421 DGQDIAHVTQDSLRSAIGMVTQDTSLLHRSIRDNIAYGRPDATDEQIRSAAASAQADGFI 480

Query: 481 QGLSDPEGNHGLDAQVGERGVKLSGGQRQRIAIARVLLKNAPILLLDEATSALDSEIEAA 540
             LSD +G+ G D  VGERG+KLSGGQRQR+AIARV+LKNAPILLLDEATSALDSE+E A
Sbjct: 481 SQLSDKQGHSGYDTLVGERGIKLSGGQRQRVAIARVMLKNAPILLLDEATSALDSEVEVA 540

Query: 541 IQESLYQLMEGKTVIAIAHRLSTIAAMDRLIVLDQGKIVEQGTHQELIKQGGIYAQLWAH 600
           IQESL ++M+GKTVIAIAHRLSTIAAMDRLIV+D G+I+EQGTH EL+ + G YA+LW H
Sbjct: 541 IQESLDEMMQGKTVIAIAHRLSTIAAMDRLIVMDDGRIIEQGTHAELLGKNGTYARLWQH 600

Query: 601 QTGGFLG 607
           Q+GGFLG
Sbjct: 601 QSGGFLG 607