Pairwise Alignments

Query, 212 a.a., dicarboxylate TRAP transporter (succinate, fumarate, L-malate, and alpha-ketoglutarate), small permease component (from data) from Shewanella loihica PV-4

Subject, 188 a.a., TRAP transporter, DctQ family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 54.3 bits (129), Expect = 1e-12
 Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 3/83 (3%)

Query: 17  LITAMT---LLVFVEVIARFFFNTGFLWIQELTLTICGWFVLFGMSYGVKVGAHIGVDAF 73
           LITAM    +LV V+V +R+  N    W +EL   +       G +  V+ GAH G+DA 
Sbjct: 26  LITAMAGMAVLVAVQVFSRYALNESLFWSEELGRILLVQLTFIGCAVAVRAGAHPGMDAL 85

Query: 74  VKKLPAQGRKYTAILAVAICLIY 96
           V+ LP +GR  T +L +   L +
Sbjct: 86  VRHLPRRGRHVTHMLVLLAALAF 108