Pairwise Alignments

Query, 212 a.a., dicarboxylate TRAP transporter (succinate, fumarate, L-malate, and alpha-ketoglutarate), small permease component (from data) from Shewanella loihica PV-4

Subject, 159 a.a., C4-dicarboxylate ABC transporter substrate-binding protein from Burkholderia phytofirmans PsJN

 Score = 50.1 bits (118), Expect = 2e-11
 Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 2/116 (1%)

Query: 12  VVLNALITAMTLLVFVEVIARFFFNTGFLWIQELTLTICGWFVLFGMSYGVKVGAHIGVD 71
           VV +  +  +++LV   V+ R+ F+    +++ + L +     +FG +  V+ G HIG+D
Sbjct: 17  VVASLSLAVLSVLVIYSVVMRYVFSDAPDFVEPIALLLVIVIAMFGAALKVREGGHIGLD 76

Query: 72  AFVKKLPAQGRKYTAILAVAICLIYCGMFLVGSWDYLAKMYQIGVPMEDIDLPHFL 127
           + VKKLP +G+           +++  M   G    +    +  +P+  I LP  L
Sbjct: 77  SLVKKLPPKGQLIATSFQHICLIVFAVMIFFGCLQMVEATAEDRIPI--IGLPESL 130