Pairwise Alignments

Query, 607 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

Subject, 602 a.a., Signal transduction histidine kinase regulating C4-dicarboxylate transport system from Pseudomonas fluorescens FW300-N2E2

 Score =  301 bits (771), Expect = 5e-86
 Identities = 197/610 (32%), Positives = 322/610 (52%), Gaps = 61/610 (10%)

Query: 24  LAFTLRVAYW--FHL-EHGYEMTRQQSNAQMKEL-LSFLSGSLSRYESIPHVLSTNPLLA 79
           LA  L    W   HL E  Y       N Q  +L ++ L G+L RYE +P +L   P L 
Sbjct: 17  LALCLAPLLWPLEHLAERYYRSELAGQNRQTLDLYVANLLGTLHRYEVLPQILGDLPALR 76

Query: 80  SALLKQDDPDTITPLNRYLEEIQSITEALDIYLVNIDGDAIAASNWQQSYSFIGKNYAFR 139
           +AL   DD  T    NR L+ I + T A  +YL++  G  +AASNW +  SF+G+N+AFR
Sbjct: 77  AALSAPDDGVTQGNANRLLKNISAQTGAEVMYLMDPSGKTLAASNWDKHDSFVGRNFAFR 136

Query: 140 PYFKDAIEGKMGRYFAVGTSSNKRGYYFSYPIYSHGYPVTPSQGEAKVLGAIVVKVDVTE 199
           PYF +A+ G++GR+F +GT+S KRGY+F+  ++             KV+G +VVKVD+  
Sbjct: 137 PYFIEAMAGRLGRFFGLGTTSAKRGYFFAAAVHDR----------EKVIGVLVVKVDLDH 186

Query: 200 IEQQSTGMARGSNYEFAISDPDHIIFLSSRPEWRLTALTPVTHQLKQRIESSRRYANREI 259
            E     +   +  +  ++D + ++ L+SR EWR  A  P+    ++ I + + Y  RE 
Sbjct: 187 TES----LWGKTPEQLLVTDHNGVVILTSRQEWRFRATRPLNDAEREAISAVQPYPTREP 242

Query: 260 SPLAIEPPFAPSLAADYQIYQIGDDKRGAEFMDNAAYMSDAGWQVHILSPMTPIYRSLPP 319
            PL                  + D+     ++     + + GW V IL+P T I R +  
Sbjct: 243 KPL-----------------NLNDNA----WLTQTQSIEETGWSVSILAPRTLIDRPVRT 281

Query: 320 LLLLYGALYLLCALALLFAIEKRKNTRRM----QQAHEQLEQRVKERTQALETSHQQLKE 375
           ++ + GA  L+  L L   +++R++         +A ++LE RV ERT  LE  +++LK+
Sbjct: 282 VVAIGGAALLVLMLLLGLMMQRRRHYLDRIAFEAKARQELEGRVAERTSDLEGLNRRLKQ 341

Query: 376 --------------AQDELIQAAKLTVIGSLSASINHEINQPLAAIRSYAQNTQTLLSRA 421
                         AQD+L+QA KL+ +G++SASI+HE+NQPLAAIRSYA+N + LL   
Sbjct: 342 EVLEREQAQQELVRAQDDLVQAGKLSALGTMSASISHELNQPLAAIRSYAENAEILLDHQ 401

Query: 422 KWDDVSSNIMTIIELTDRLAAIVSQFKSFTRKSQGNDKAISVAQCIRDALTIVQPEVDKQ 481
           + +D   N+  I ELT R+A+I++  ++F R+ +   +++++   + DAL ++       
Sbjct: 402 RTEDARGNLKLISELTGRMASIIAHLRAFARRDRHAPESVALQPALDDALALLAKRRRSM 461

Query: 482 GIDLVLNNTECQTLLWGDPIRLQQVLINLMSNAMVAMRANNP--KQLIIGVVVSNRLEIT 539
            ++L+ +       +     RL+QVL NL++NA+ A+    P  K  +        + + 
Sbjct: 462 EVELIRDLPAATLWVEAGETRLRQVLGNLLANALDALTEKGPPRKLWLSAQATETGVNLY 521

Query: 540 IEDTGTGIDESQMQKIFDPYYTSS--RQGLGLGLSISRRIVEAMQGKISVANRQQGGAIF 597
           I D G G     + +  +P+YT+    QGLGLGL+I   ++ A  G++S AN ++GGA+ 
Sbjct: 522 IRDNGPGFCMEALGRAGEPFYTTKTRTQGLGLGLAICDTLMRAFGGELSFANHKEGGALI 581

Query: 598 QITLPIHAVG 607
            + L   A G
Sbjct: 582 TLKLRAGAPG 591