Pairwise Alignments

Query, 607 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

Subject, 588 a.a., cytochrome C biogenesis protein CcmE from Pseudomonas fluorescens FW300-N2C3

 Score =  281 bits (720), Expect = 4e-80
 Identities = 190/589 (32%), Positives = 312/589 (52%), Gaps = 28/589 (4%)

Query: 19  IILLGLAFTLRVAYWFHLEHGYEMTRQQSNAQMKELLSFLSGSLSRYESIPHVLSTNPLL 78
           +IL G A    +A         +    +++ Q+    + L   + RY ++P VL+ +P L
Sbjct: 16  LILAGAAVAATLAVRHAEREALKEDASRASQQLALYANSLHTLIERYRALPAVLALDPEL 75

Query: 79  ASALLKQDDPDTITPLNRYLEEIQSITEALDIYLVNIDGDAIAASNWQQSYSFIGKNYAF 138
            SAL           LNR LE+I    ++  + L++  G A+AASNW+   S++G NY F
Sbjct: 76  RSALKGPVSAAQQAALNRKLEQINGAAQSSTLELLDHSGLAVAASNWRLPSSYVGHNYGF 135

Query: 139 RPYFKDAIEGKMGRYFAVGTSSNKRGYYFSYPIYSHGYPVTPSQGEAKVLGAIVVKVDVT 198
           RPYF        GR++AVG +S   GY+ S         VT   GE   LGA+VVK++  
Sbjct: 136 RPYFIQTRTQGTGRFYAVGVTSGIPGYFLSSA-------VTGDNGE--FLGAMVVKLEFP 186

Query: 199 EIEQQSTGMARGSNYEFAISDPDHIIFLSSRPEWRLTALTPVTHQLKQRIESSRRYANRE 258
           E+E++     +GS+    +SD   IIF+++RP WR   L P+T   +  ++++R+Y  + 
Sbjct: 187 ELERE---WRQGSD-TLLVSDARGIIFIANRPGWRYRHLQPLTDSDRAELKATRQYDKQP 242

Query: 259 ISPLAIEPPFAPSLAADYQIYQIGDDKRGAEFMDNAAYMSDAGWQVHILSPMTPIYRSLP 318
           +  LA EP        +  + ++      A+++  +  +S  GW +H+L         L 
Sbjct: 243 LQALAHEP--LRRFDDNSHLARVEAPDGSADYLWESLPLSAEGWTLHLLRRPQIAVEDLR 300

Query: 319 PLLLLYGALYLLCALALLFAIEKRKNTRRMQQAHEQLEQRVKERTQALETSHQQLKEAQD 378
              L    L+L     LLF  ++ +  +  Q++ E+LE+ V+ERT+ L T       AQD
Sbjct: 301 NAGLAAAGLWLALVFLLLFLNQRWRLAKLRQRSREELERLVEERTRDLRT-------AQD 353

Query: 379 ELIQAAKLTVIGSLSASINHEINQPLAAIRSYAQNTQTLLSRAKWDDVSSNIMTIIELTD 438
            L+Q+AKL  +G +SA++ HEINQPL A R      + LL   + DD    +  + ++  
Sbjct: 354 GLVQSAKLAALGQMSAALAHEINQPLTAQRMQLATLRLLLDHGRVDDAYKALKPVDDMLT 413

Query: 439 RLAAIVSQFKSFTRKS-QGNDKAISVAQCIRDALTIVQPEVDKQGIDLVLNNTECQTLLW 497
           R+AA+    K+F RKS  G  + + +A  +  AL ++   +  + +  VL+ T     + 
Sbjct: 414 RMAALTGHLKTFARKSPSGLRERLDLAAVVDQALQLLDTRLRDEQVSTVLHLTR-PAWVR 472

Query: 498 GDPIRLQQVLINLMSNAMVAMRANNPKQLIIGVVVSNRL-EITIEDTGTGIDESQMQKIF 556
           GD IRL+QVLINL+ NA+ AM     K+L + +   ++L  +T+ D+GTGI E  + ++F
Sbjct: 473 GDAIRLEQVLINLLRNALDAMAGQPLKRLEVRLEADDQLWRLTVSDSGTGIAEEHLGQVF 532

Query: 557 DPYYTSS--RQGLGLGLSISRRIVEAMQGKISVANRQQGGAIFQITLPI 603
           DP++T+     GLGLGL++S  I+    G++S A+  + GA+F +TLPI
Sbjct: 533 DPFFTTKPVGDGLGLGLAVSFAIIHESGGRLS-ADNHENGAVFCVTLPI 580