Pairwise Alignments

Query, 607 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

Subject, 600 a.a., putative two-component sensor histidine kinase protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  598 bits (1542), Expect = e-175
 Identities = 314/605 (51%), Positives = 422/605 (69%), Gaps = 15/605 (2%)

Query: 1   MPYMSKIITRRKYLGVGFIILLGLAFTLRVAYWFHLEHGYEMTRQQSNAQMKELLSFLSG 60
           M   ++I  R +Y     + L+GL   L + + +H+  G       S AQ+ EL+S L G
Sbjct: 1   MQMTAQIHRRLRYT---LLALVGLVGVLYLTWSWHVRSGVSDLADTSRAQLGELVSLLDG 57

Query: 61  SLSRYESIPHVLSTNPLLASALLKQDDPDTITPLNRYLEEIQSITEALDIYLVNIDGDAI 120
            LSR+E+IPHVLSTNP+LA  LL Q D D +  LN+YLEE++ ITEA DIYL++  G A+
Sbjct: 58  MLSRFETIPHVLSTNPMLADTLLNQRDMDKVHRLNKYLEELRHITEASDIYLIDALGVAV 117

Query: 121 AASNWQQSYSFIGKNYAFRPYFKDAIEGKMGRYFAVGTSSNKRGYYFSYPIYSHGYPVTP 180
           AASNWQQSYSF+G++Y+FRPYF +AI G+ G Y+AVGT+S+KRGYYFS+P+   G     
Sbjct: 118 AASNWQQSYSFVGQDYSFRPYFTEAIAGRQGNYYAVGTASDKRGYYFSFPVEDSG----- 172

Query: 181 SQGEAKVLGAIVVKVDVTEIEQQSTGMARGSNYEFAISDPDHIIFLSSRPEWRLTALTPV 240
                 VLGAIVVK+DV +IE Q++G+A+   Y+F I+DPD+I+F S+R EWRLT+L P 
Sbjct: 173 -----TVLGAIVVKLDVLDIETQASGVAQAGQYDFIITDPDNIVFASNRAEWRLTSLGPF 227

Query: 241 THQLKQRIESSRRYANREISPLAIEPPFAPSLAADYQIYQIGDDKRGAEFMDNAAYMSDA 300
           T   +  + +S+RYA R+I+ L I P +   +      Y+IG   + A+++D +  M  A
Sbjct: 228 TDSKRYALNASKRYAKRQITELDIHPAYK-GVTEGVNAYRIGSGLKAADYLDTSTAMIKA 286

Query: 301 GWQVHILSPMTPIYRSLPPLLLLYGALYLLCALALLFAIEKRKNTRRMQQAHEQLEQRVK 360
           GW+VH+L+P+ P+Y SL  +LLL    Y L  L  L   E+R +  RMQQ+ ++LEQRVK
Sbjct: 287 GWRVHVLTPLAPVYSSLSQVLLLSATCYGLLLLFTLLQRERRHSLARMQQSRDELEQRVK 346

Query: 361 ERTQALETSHQQLKEAQDELIQAAKLTVIGSLSASINHEINQPLAAIRSYAQNTQTLLSR 420
           ERT  LE ++ QLK+ QDELIQAAKLTV+G++SASINHE+NQPLAAIRSY QNTQT L R
Sbjct: 347 ERTAELEAANTQLKDTQDELIQAAKLTVVGTMSASINHELNQPLAAIRSYTQNTQTFLER 406

Query: 421 AKWDDVSSNIMTIIELTDRLAAIVSQFKSFTRKSQGNDKAISVAQCIRDALTIVQPEVDK 480
                   N+  I+ELTDRLA IV QFKSFTRKSQG D  + +A C++ ALTIVQPE+DK
Sbjct: 407 DMPGRARENLAIILELTDRLADIVGQFKSFTRKSQGKDGVVMLANCLQQALTIVQPELDK 466

Query: 481 QGIDLVLNNTECQTLLWGDPIRLQQVLINLMSNAMVAMRANNPKQLIIGVVVSNRLEITI 540
           Q   L ++  +    +W D  RLQQVL+NL++NA+ AM  +  K+L I ++  + + I I
Sbjct: 467 QKAQLTIHCEDESLKVWCDGTRLQQVLVNLITNALNAMSQSPVKRLSISLLGGDPVTIRI 526

Query: 541 EDTGTGIDESQMQKIFDPYYTSS-RQGLGLGLSISRRIVEAMQGKISVANRQQGGAIFQI 599
           +D+G G+ +S M+KIF+PYYT+S RQGLGLGLSISRRI+E+MQG I VAN  +GGAIF I
Sbjct: 527 QDSGPGVRDSLMEKIFEPYYTTSERQGLGLGLSISRRIIESMQGDIRVANAPEGGAIFDI 586

Query: 600 TLPIH 604
           TLP +
Sbjct: 587 TLPAY 591