Pairwise Alignments
Query, 920 a.a., polysaccharide export protein (RefSeq) from Shewanella loihica PV-4
Subject, 377 a.a., polysaccharide export protein from Rahnella sp. WP5
Score = 77.8 bits (190), Expect = 1e-18
Identities = 59/250 (23%), Positives = 124/250 (49%), Gaps = 17/250 (6%)
Query: 139 EYLVGPGDRIKVQLF---------GKENKEYDLV--INREGSIQFPELGPISVAGLSFAE 187
+Y +G GD + V ++ G+ D +N +G+I +P +G ++VAG + ++
Sbjct: 83 QYRIGSGDVLMVTVWDHPELTTPAGQYRSASDTGNWVNTDGTIFYPYIGKVAVAGKTVSQ 142
Query: 188 LRESLSHRISQQMIGIESNITMGELRSIRIFIAGDAYKPGSYTVSSLS-TITQALFVAGG 246
+RE +S R++ + + ++++ RS +++++G+ K ++++ T+ A+ AGG
Sbjct: 143 VREEISSRLATYIESPQVDVSVASFRSQKVYVSGEVVKSSQQPITNIPLTVIDAINAAGG 202
Query: 247 VNEIGSLRNIQVKRNGKLVGSMDLYDLLMRGDASGDIRLRSGDVVFIPPVGGL-VSITGE 305
+ RN+ + NGK + L L+ +GD + + L GD++++P L V + GE
Sbjct: 203 LAPDADWRNVVLTHNGK-DRRISLEALMQKGDLTQNQLLFPGDILYVPRNDDLKVFVMGE 261
Query: 306 VRRPAIYELKRN-ETVADIVAMAAGVKPGAYPKSS--SIERYNSNGLRSIVNVDLTSTQG 362
V + + ++ R+ T+A+ + A GV S I + N I N+ + +
Sbjct: 262 VGKQSTLKMDRSGMTLAEALGNADGVSQVMSDASGIFVIRQIKDNKQGKIANIYQLNAKD 321
Query: 363 KSTKAQAGDF 372
S + +F
Sbjct: 322 ASAMVMSTEF 331
Score = 35.0 bits (79), Expect = 9e-06
Identities = 46/179 (25%), Positives = 74/179 (41%), Gaps = 13/179 (7%)
Query: 588 TQVVAISGKVRHPGVYPLSQ-GAKVKDLVIAAGGLVEGAYTARAELTTTVIGSEESSVNH 646
+Q V +SG+V P++ V D + AAGGL A LT G +
Sbjct: 169 SQKVYVSGEVVKSSQQPITNIPLTVIDAINAAGGLAPDADWRNVVLTHN--GKDRRISLE 226
Query: 647 SSVNLDDALAGIDSANVVLSSRDILTVMTTPDWQENKAVEIRGEV-KFPGMYNIRRGETL 705
+ + D + N +L DIL V D + V + GEV K + R G TL
Sbjct: 227 ALMQKGDL-----TQNQLLFPGDILYVPRNDDLK----VFVMGEVGKQSTLKMDRSGMTL 277
Query: 706 ADVIDRAGGFTQYAYLPSSVFVRESVRQQEQLEIKKLADQLRRDIATRGVSKDGNVVNY 764
A+ + A G +Q S +FV ++ +Q +I + +D + +S + + Y
Sbjct: 278 AEALGNADGVSQVMSDASGIFVIRQIKDNKQGKIANIYQLNAKDASAMVMSTEFQLQPY 336