Pairwise Alignments

Query, 920 a.a., polysaccharide export protein (RefSeq) from Shewanella loihica PV-4

Subject, 373 a.a., polysaccharide biosynthesis/export protein from Marinobacter adhaerens HP15

 Score = 86.3 bits (212), Expect = 3e-21
 Identities = 65/223 (29%), Positives = 119/223 (53%), Gaps = 20/223 (8%)

Query: 126 TTFAPVSDVPVPG---EYLVGPGDRIKVQLF-----------GKENKEYDLVINREGSIQ 171
           T  AP S++  P    EY VG GD ++V ++            + + E   V+N +G+I 
Sbjct: 66  TVPAPASNLIQPDDAYEYRVGVGDVLQVIVWDHPELTIPAGENRSSAETGNVVNSDGTIY 125

Query: 172 FPELGPISVAGLSFAELRESLSHRISQQMIGIESNITMGELRSIRIFIAGDAYKPGSYTV 231
           +P +G +  AG +  E+RE ++ R+++ +   E ++++   +S RI+I+G    PG Y +
Sbjct: 126 YPYIGYVQAAGKTTIEIREDIASRLARFIESPEVDVSVASFQSRRIYISGAVETPGVYPL 185

Query: 232 SSLST-ITQALFVAGGVNEIGSLRNIQVKRNGKLVGSMDLYDLLMRGDASGDIRLRSGDV 290
           +++ T +  A+  AGG++E    RN+ + R GK    + L  +L  G+   +I L+SGDV
Sbjct: 186 TNVPTRLVDAISQAGGIDEGADWRNVILTREGKDY-RLSLKAILESGNTQHNILLQSGDV 244

Query: 291 VFIPPVGG--LVSITGEVRRPAIYELKRNE-TVADIVAMAAGV 330
           V + P+G    V + G+V       + RN  T+A+ ++   G+
Sbjct: 245 VTV-PLGDDQKVFVLGQVASTQTLPMGRNGLTLAEAISNVGGL 286



 Score = 52.4 bits (124), Expect = 5e-11
 Identities = 60/215 (27%), Positives = 95/215 (44%), Gaps = 20/215 (9%)

Query: 591 VAISGKVRHPGVYPLSQ-GAKVKDLVIAAGGLVEGAYTARAELTTTVIGSEESSVNHSSV 649
           + ISG V  PGVYPL+    ++ D +  AGG+ EG     A+    ++  E      S  
Sbjct: 171 IYISGAVETPGVYPLTNVPTRLVDAISQAGGIDEG-----ADWRNVILTREGKDYRLSLK 225

Query: 650 NLDDALAGIDSANVVLSSRDILTVMTTPDWQENKAVEIRGEVKFPGMYNI-RRGETLADV 708
            + +  +G    N++L S D++TV    D    + V + G+V       + R G TLA+ 
Sbjct: 226 AILE--SGNTQHNILLQSGDVVTVPLGDD----QKVFVLGQVASTQTLPMGRNGLTLAEA 279

Query: 709 IDRAGGFTQYAYLPSSVFVRESVRQQEQLEIKKLADQLRRDI--ATRGVSKDGNVVNYSD 766
           I   GG  +     + VFV   +R+ E  +  K  D  + D+  AT  V  D  V+N  D
Sbjct: 280 ISNVGGLNERQAEATGVFV---IRRAEDTDADKPIDLFQLDMSDATALVLADRFVLNDRD 336

Query: 767 AKMMLT--DLENIKAVGRLVVDLSAISIGIEQADI 799
              + T       + +  L    SA+ +G   AD+
Sbjct: 337 LIYVTTAPAARWNRVISLLTPSFSALFLGDRVADL 371



 Score = 30.4 bits (67), Expect = 2e-04
 Identities = 28/129 (21%), Positives = 57/129 (44%), Gaps = 15/129 (11%)

Query: 589 QVVAISGKVRHPGVYPLSQ-GAKVKDLVIAAGGLVE------GAYTARAELTTTVIGSEE 641
           Q V + G+V      P+ + G  + + +   GGL E      G +  R    T      +
Sbjct: 253 QKVFVLGQVASTQTLPMGRNGLTLAEAISNVGGLNERQAEATGVFVIRRAEDTDA----D 308

Query: 642 SSVNHSSVNLDDALAGIDSANVVLSSRDILTVMTTPDWQENKAVEIRGEVKFPGMYNIRR 701
             ++   +++ DA A + +   VL+ RD++ V T P  + N+ + +      P    +  
Sbjct: 309 KPIDLFQLDMSDATALVLADRFVLNDRDLIYVTTAPAARWNRVISL----LTPSFSALFL 364

Query: 702 GETLADVID 710
           G+ +AD+++
Sbjct: 365 GDRVADLLE 373