Pairwise Alignments

Query, 127 a.a., flagellar motor switch protein (RefSeq) from Shewanella loihica PV-4

Subject, 136 a.a., flagellar motor switch protein FliN from Vibrio cholerae E7946 ATCC 55056

 Score =  176 bits (447), Expect = 8e-50
 Identities = 93/130 (71%), Positives = 108/130 (83%), Gaps = 6/130 (4%)

Query: 4   EDTGDDWAAAMAEQA------LEEAQAVELDELADSSKPLTEEEAAKLDTIMDIPVTISM 57
           E   ++WAAA+ E        ++E  A  L+EL +++ P+T++E  KLDTIMDIPVTISM
Sbjct: 7   ERLAEEWAAALGEDPNAPDIDVDEILAAPLEELKNTAPPITDDERRKLDTIMDIPVTISM 66

Query: 58  EVGRSFINIRNLLQLNQGSVVELDRVAGEPLDVMVNGTLIAHGEVVVVNDKFGIRLTDVI 117
           EVGRS I+IRNLLQLNQGSVVELDR+AGE LDVMVNGTLIAHGEVVVVNDKFGIRLTDVI
Sbjct: 67  EVGRSKISIRNLLQLNQGSVVELDRIAGESLDVMVNGTLIAHGEVVVVNDKFGIRLTDVI 126

Query: 118 SQTERIKKLK 127
           SQTERIKKL+
Sbjct: 127 SQTERIKKLR 136