Pairwise Alignments

Query, 274 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

Subject, 251 a.a., Inner membrane protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  110 bits (275), Expect = 3e-29
 Identities = 69/232 (29%), Positives = 106/232 (45%), Gaps = 2/232 (0%)

Query: 39  ASWRAILKRRMPYFRALPSDLQLQLKRHIQIFIAEKQFVGCQGIEIDDEIRVTIAAQACL 98
           A W+A+      +  AL    Q +L+     F+ +K      G+ +     V +AA  CL
Sbjct: 15  ALWQAVCTE-CAWVTALDPPRQHRLRALTTQFLQQKTISPVHGLTLTPHDAVLLAATCCL 73

Query: 99  LLLNRDTDYYPKLKQILVYPSLFIVNQTQQNGDGTFWERKNILSGESWEFGKVVLSWHTT 158
            LLN     +    Q++VYP  F V +T  +  G      + L GE+WE G +++SW   
Sbjct: 74  PLLNIGAAGWRGWSQLIVYPDAFRVQRTHMDAAGVMHAWDDTLIGEAWEHGPLIVSWADV 133

Query: 159 KEDAAQPYDGHNVVIHEFAHQLDQEDGHSNGAPILAHANDYQSWSTVMAQEFTRLREDAK 218
           + D A P  G NVV+HE AH+LD  DG  +G P L  A  Y+ W+    Q +T       
Sbjct: 134 QADLADPTAGFNVVVHEMAHKLDALDGALDGTPPLP-AAQYRDWARDFQQAYTAFCRQVD 192

Query: 219 WHQPSLFNYYGATNEAEFFAVITETFFERPHEFYQQHQALYQQMSHFFKLDP 270
               +  + Y A    EFFAV++E  F  P    ++   +   ++ F+   P
Sbjct: 193 AGTQTDIDPYAAEAPEEFFAVLSEYHFSAPQVIAREMPRVAAHLTRFYGASP 244