Pairwise Alignments

Query, 299 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

Subject, 291 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  206 bits (525), Expect = 4e-58
 Identities = 111/288 (38%), Positives = 164/288 (56%), Gaps = 20/288 (6%)

Query: 24  LLSTVSLGSAQLAHAEQQGFSVTLGGFYANSDSGIVVQNPDLGKDFTLDFENDLALVEKE 83
           LL    LG+  LA      F++ LGGFY+ SD+ + V +P  G  FTLD+E+DL L E E
Sbjct: 12  LLMVSLLGAPALAG----DFTIELGGFYSQSDTNMEVTDPTSGLGFTLDYESDLQLAENE 67

Query: 84  LLPTLELAYWFNENHGVYLDWKRLDREARNRSISKPYEYTEVNSGQTYLVQAGADISTIF 143
            LP +EL Y FN+ H  YLDWK+L R A  ++++ P++  E+N    Y ++AG  +++  
Sbjct: 68  FLPFVELNYHFNDRHNFYLDWKQLHRNAETQALTNPFQ-IEIND-TIYDIRAGGKLNSTL 125

Query: 144 NVDILRLGYRYNFYSGEDVDLTLLAGLHIMWLKLQFVGEIGACVDDQCQVVDVNPKSNAL 203
           N+DILRLGY Y+   G   D+ L  GLH M++   F G IG C   +  +      S A+
Sbjct: 126 NIDILRLGYGYDVIQGSHYDIGLSLGLHTMFINTGFEGVIGVCATSEALINVCG--SQAI 183

Query: 204 -----TEVTAPLPDLGLQGRYRINDRWSLSGWAQYFYVSLGDTKGQLFDFSAGVNYRLND 258
                  VTAPLPD G+   Y     W+L   AQYF++ L D +G+L D   G++ +   
Sbjct: 184 PRIVDEHVTAPLPDFGVYANYEFIQGWTLVSRAQYFFIKLNDVEGELIDVKLGLDAQFTS 243

Query: 259 SLDVELGYKYYKIDVEVEK-------DLADFDIYYGFKGPALSLTYQF 299
              + + Y YYK+DV++++        +AD++IYY F GP LS++Y F
Sbjct: 244 GWRLSVAYNYYKVDVDIDQKSADKDAKVADYNIYYSFIGPMLSVSYTF 291