Pairwise Alignments

Query, 855 a.a., DNA mismatch repair protein (RefSeq) from Shewanella loihica PV-4

Subject, 853 a.a., DNA mismatch repair protein MutS from Klebsiella michiganensis M5al

 Score = 1096 bits (2835), Expect = 0.0
 Identities = 558/848 (65%), Positives = 671/848 (79%), Gaps = 4/848 (0%)

Query: 9   LEKHTPMMRQYLTLKAETPDMLLFYRMGDFYELFYDDAKRASELLGISLTARGKSGGDPI 68
           L+ HTPMM+QYL LKA+ P++LLFYRMGDFYELFYDDAKRAS+LL ISLT RG S G+PI
Sbjct: 7   LDAHTPMMQQYLKLKAQHPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPI 66

Query: 69  PMAGIPYHAVEGYLAKLVQLRVSVAICEQIGDPATTKGPVERKIVRIVTPGTLTDEALLQ 128
           PMAGIP+HAVE YLAKLV    SVAICEQIGDPATTKGPVERK+VRIVTPGT++DEALLQ
Sbjct: 67  PMAGIPHHAVENYLAKLVNQGESVAICEQIGDPATTKGPVERKVVRIVTPGTISDEALLQ 126

Query: 129 ERQDNLLAAVYHGKVGFGYATLDVSSGRFVVTELASKEALEAELQRTNPAELLYSEDFSE 188
           ERQDNLLAA++    GFGYATLD+SSGRF ++E A +E + AELQRTNPAELLY+EDF+E
Sbjct: 127 ERQDNLLAAIWQDGKGFGYATLDISSGRFRLSEPADRETMAAELQRTNPAELLYAEDFAE 186

Query: 189 PALIASLSGKRRRPEWEFDYDTSYKLLLEQFGTKDLYGFGLGEVRLSLQAAGCLIQYVKD 248
            +LI    G RRRP WEF+ DT+ + L  QFGT+DL GFG+      L AAGCL+QYVKD
Sbjct: 187 SSLIEGRRGLRRRPLWEFEIDTARQQLNLQFGTRDLVGFGVENAPRGLCAAGCLLQYVKD 246

Query: 249 TQRTALPHINAITRFNQCDSIVLDAATRKNLELTRNLQGGSDNTLASVLDNTATPMGSRM 308
           TQRT+LPHI +IT   Q DSI++DAATR+NLE+T+NL GG +NTLASVLD T TPMGSRM
Sbjct: 247 TQRTSLPHIRSITMERQQDSIIMDAATRRNLEITQNLAGGFENTLASVLDCTVTPMGSRM 306

Query: 309 LQRWIHEPLRNHNIIRARHDAIDELLDNGYHESLHEQLKALGDIERITARLAIRSARPRD 368
           L+RW+H P R+  ++  R   I  L +  ++  L   L+ +GD+ERI ARLA+R+ARPRD
Sbjct: 307 LKRWLHMPARDTAVLVERQQTIGALQE--HYTELQPVLRQVGDLERILARLALRTARPRD 364

Query: 369 FARLRQALALLPEIQQQLADCNSPHLKALSSHLGDFPEEHALLSRAIVDNPPMLIRDGGV 428
            AR+R A   LP ++  LAD +   ++ L   +G+F E   LL RAI+D PP+L+RDGGV
Sbjct: 365 LARMRHAFQQLPALRAMLADVDCAPVQRLREKMGEFSELRELLERAIIDAPPVLVRDGGV 424

Query: 429 IKEGYHNELDEWRKLSQGATDYLAELEAREKAATGASTLKVGYNRVHGYYIEVSRRESDL 488
           I  GYH ELDEWR L+ GATDYL  LE RE+   G  TLKVGYN VHGYYI++SR +S  
Sbjct: 425 IAPGYHAELDEWRGLADGATDYLDRLEVRERERLGLDTLKVGYNAVHGYYIQISRGQSQH 484

Query: 489 VPMSYQRRQTLKNTERYIVAELKEHEEKVLSSQGKALALEKQLWEELFDLLMPRLHELQA 548
            P+ Y RRQTLKN ERYI+ ELKE+E+KVL+S+GKALALEKQL++ELFD+L+P L +LQ 
Sbjct: 485 APIHYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYDELFDMLLPHLGDLQQ 544

Query: 549 FARAAAELDVITNFAERAEQLDYHRPELTAQSGIHIEAGRHPVVERVSQTPFIANPVSLN 608
            A A AELDV+ N AERAE L+Y  P  + + GI I  GRHPVVE+V + PFIANP+ L 
Sbjct: 545 SASALAELDVLVNLAERAETLNYCCPTFSDKPGIRISEGRHPVVEQVLKEPFIANPLHLA 604

Query: 609 PARRMLIVTGPNMGGKSTYMRQVALITLMAHIGSFVPAQKAAIGPVDRIFTRIGAADDLA 668
           P RRMLI+TGPNMGGKSTYMRQ ALI L+A+IGS+VPA+K  IGP+DRIFTR+GAADDLA
Sbjct: 605 PQRRMLIITGPNMGGKSTYMRQTALIALLAYIGSYVPAEKVDIGPIDRIFTRVGAADDLA 664

Query: 669 SGRSTFMVEMTETANILHNATPESLVLMDEIGRGTSTYDGLSLAWSAAEHLAQNLKSMTL 728
           SGRSTFMVEMTETANILHNAT  SLVLMDEIGRGTSTYDGLSLAW+ AE+LA  +K++TL
Sbjct: 665 SGRSTFMVEMTETANILHNATEHSLVLMDEIGRGTSTYDGLSLAWACAENLANKIKALTL 724

Query: 729 FATHYFELTQLPDQMENVANVHLDAIEHDDTIAFMHAVQEGAASKSYGLQVAALAGVPAK 788
           FATHYFELTQLP++ME VANVHLDA+EH DTIAFMH+VQ+GAASKSYGL VAALAGVP +
Sbjct: 725 FATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKE 784

Query: 789 VVQAAKHKLHHLESRDREEELPELRQAQLSM--TMPETSKALDRLDTIDPDSLTPRQALD 846
           V++ A+ KL  LES        ++   Q+S+     ETS A++ L+ +DPDSLTPRQAL+
Sbjct: 785 VIKRARQKLRELESIAPSAAATQVDGTQMSLLSAPEETSPAVEALENLDPDSLTPRQALE 844

Query: 847 LLYELKQL 854
            +Y LK L
Sbjct: 845 WIYRLKSL 852