Pairwise Alignments

Query, 734 a.a., (p)ppGpp synthetase I, SpoT/RelA (RefSeq) from Shewanella loihica PV-4

Subject, 746 a.a., bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase from Ralstonia solanacearum GMI1000

 Score =  543 bits (1399), Expect = e-158
 Identities = 295/738 (39%), Positives = 441/738 (59%), Gaps = 39/738 (5%)

Query: 27  ADDASTLLALIKQVEALVAKHDANDTL----LIGRARELIEILAPLNMDIETLQAAVIFV 82
           AD A+   A+ + +E L      + TL    L+  AR  + IL  L +D  +LQAA +F+
Sbjct: 16  ADRAAREAAVARALECLADHAGDHQTLTGEPLVSHARGTVAILEGLRVDAPSLQAAALFL 75

Query: 83  VFDAGLMTEEQMLELFGDKLTTLVNSVVTMDAIGAL-------------KVNEQSRNAEP 129
           +       E+ +   FG ++  LV+ V  +  IGA+             K   ++R A  
Sbjct: 76  LPILATDNEKAIEPAFGGEVARLVHDVRQLLRIGAIAGMASPAEAGVTRKNEAEARRA-- 133

Query: 130 QIDNIRKMLLAMVEDVRAVVIKLAERICLLREVKNADEETRVLLAREIADIYAPLANRLG 189
           Q++ +RKMLLA  +D+R V+I+LA R+  LR +          +ARE  DIYAPLANRLG
Sbjct: 134 QVEALRKMLLAFAQDIRVVLIRLASRLQSLRWLAQNKLPAPEGMARETLDIYAPLANRLG 193

Query: 190 IGQLKWELEDISFRYLHPDTYKDIAKQLDGKRMDREIYIENFVNQLQQRLDEEQIRAKVY 249
           I QLKWELED+ FR+  PDTYK IA+ LD KR++RE +I   + +LQQ L +  I A+V 
Sbjct: 194 IWQLKWELEDLGFRFEDPDTYKRIARLLDEKRIEREQFIGEAIARLQQTLRDAGIHAEVS 253

Query: 250 GRPKHIYSIWKKMRGKDLTFDELFDVRAVRIVTERLQDCYGALGVVHTLWHHIPKEFDDY 309
           GRPKHIYSIW+KMRGKDL F +L+DVRA R++ + ++DCY  LG VH +W  IPKEFDDY
Sbjct: 254 GRPKHIYSIWRKMRGKDLDFADLYDVRAFRVIVDDIKDCYTVLGFVHHMWQPIPKEFDDY 313

Query: 310 VANPKPNGYQSIHTIVVGPEGKTVEIQIRTEQMHEDAELGVAAHWKYKEGTTGKQSG--- 366
           ++ PK NGY+S+HT+V+G +G+ +E+QIRT +MH  AE GVAAHW+YKE  +   +G   
Sbjct: 314 ISRPKTNGYKSLHTVVIGDDGRALEVQIRTREMHHFAEYGVAAHWRYKEAGSKGYAGQFS 373

Query: 367 ----YEEKINWLRKILQWQED----VAESGNLVDEVRSQVFEDRAYVFTPNGDVVDLPMG 418
               Y+EKI WLR++L W++D    VA+  +  ++++    +D  YV TP   V+ LP G
Sbjct: 374 ASERYDEKIAWLRQLLAWKDDAEHTVAQEDSPWEQLKHTELDDHIYVLTPQARVIALPQG 433

Query: 419 STVLDFAYYIHSQVGHKCIGAKVDGRIVPFTYQVETGERVEIITSKHPNPKRDWLNPNLG 478
           +T +DFAYY+HS +GH+C GA+VDG +VP    ++ G+ VEI+T K   P RDWLNP L 
Sbjct: 434 ATPVDFAYYLHSDLGHRCRGARVDGTMVPLNTPLKNGQTVEIVTVKQGGPSRDWLNPELH 493

Query: 479 YIKASRTRSKIQHWFKQQDRDKNIVAGREMLEAELARSGLTLKDAHSAVERFNMVGMDDL 538
           Y+ ++R R+K++ WF   + ++ +  GR +++  L R G T  +      +      D+L
Sbjct: 494 YLASNRARAKVRAWFNALELEETLAQGRILIDKTLQREGKTAVNLEELAAKLGFKTPDEL 553

Query: 539 LAGIGGGDVRLNQVVNHVQSRMRVNEVSEEEALED--LLKKNQARATGKG-KGQVEVNGV 595
            A +   +  L     HV++ +R +      A ++  + KK++A +  +G K  V V GV
Sbjct: 554 YAMVAKDEFSL----RHVEAVLRTDGAPPAPADDEASITKKSRATSVARGAKSGVLVVGV 609

Query: 596 GNLLSHIAKCCQPVPGDEIFGFITKGRGISVHRADCEQVKELMRVHPERSVDVVWGENYS 655
            +LL+ +++CC+P P D I GF+T+GRG+S+HR +C   ++L    P R +   WG    
Sbjct: 610 DSLLTQMSRCCKPAPPDLIVGFVTRGRGVSIHRQNCATFQQLAARAPGRVIQTEWGNRGE 669

Query: 656 GGYKLKLKVLANDRSGLLRDLTSVLAAEKSNVLAMSSSSDVKTQTAAIELELELYNLEGL 715
             Y + + V A DR GLLRD++ +L+ EK NV  + + S      A ++   E+     L
Sbjct: 670 AVYPVDIHVEALDRQGLLRDISEILSREKINVTGVRTLS--SKGVAKMQFTAEVSEATQL 727

Query: 716 SRVIAKLSQVAGVIEARR 733
            R +  + +V GV+ ARR
Sbjct: 728 QRALILIEEVTGVLSARR 745