Pairwise Alignments

Query, 553 a.a., recombination and repair protein (RefSeq) from Shewanella loihica PV-4

Subject, 550 a.a., DNA repair protein RecN from Pedobacter sp. GW460-11-11-14-LB5

 Score =  323 bits (827), Expect = 1e-92
 Identities = 188/552 (34%), Positives = 315/552 (57%), Gaps = 4/552 (0%)

Query: 1   MLCQLSINNFAIVRFLELDFKSGMTSITGETGAGKSIAIDALGLCLGNRADANTVRPGAS 60
           ML +LSI N+A++  L+++F  G+  ITGETGAGKSI + AL L LG RA++        
Sbjct: 1   MLQKLSIRNYALIDSLDIEFDKGLNIITGETGAGKSIILGALSLILGQRAESKYFFNQDK 60

Query: 61  KAEVSARFALNDIPLAKRWLEDNDLELDDECILRRTIGSDGRSRAYINGNPVPLNQMRAL 120
           K  +   FAL D  L K   E+NDL+  +E ILRR I  DG++R++IN  PV L+ ++ +
Sbjct: 61  KCVIEGSFALADENL-KELFEENDLDFSNESILRREISIDGKTRSFINDTPVNLSVLKQI 119

Query: 121 GQQLIGIHGQHAHHAMLKSEHQLTLLDSYANHKMLLEACSASYQRFKLIQKELSQLQQSQ 180
           G++LI IH QHA   +  ++ QL ++DS ANH+ LL    + +++ +     L +L    
Sbjct: 120 GEKLIDIHSQHATQEINDADFQLLIVDSLANHQSLLFNYRSGFKKLRQDTNLLKKLVSEA 179

Query: 181 HERIARKQLLQYQVEELDEFALGEEEFDEIEAEHKKLANGTALIQACQRTLYLLQDNEEG 240
            E   ++   Q+   EL++  L E E  E+E E ++L +   + +A      L+ ++E  
Sbjct: 180 DEARNKQDYEQFLFNELEQAKLQEGEQQELEQELERLTHAETIKRALLTASGLINESEPS 239

Query: 241 AIESLLNMSLDQAQELEGYDPELKGVGNMLNDALIQVQESSSELQRYLDKLELDPEHFAA 300
           A++ L   SL Q Q +E +DP +  +   L  ++I++++ + E+    +      +    
Sbjct: 240 ALQILKEASL-QLQSIEKFDPAINVLYERLRSSIIEIKDITDEVSGIEENTLHSADRLEL 298

Query: 301 LEQRLSKIMMLARKHHV-NAKDLYQHHQALSQELSELDSDEEKLDEIAQQLESCRESFIA 359
           + QRL     L +KH V +  +L    + L + L++L S +E + ++ Q++E  ++    
Sbjct: 299 VNQRLDLFYSLQQKHRVADNTELLAVQKQLEENLNKLLSSDEHIGKLQQEIEQLKKELHK 358

Query: 360 HAQKLSQSRQRYAKELDKQVTRSIHELSMPKGKFIIDVQFNPEMMSPNGCDTVEFQVTTN 419
            A +LS +R++  K +++Q + ++ ++ M   K ++D +   E+ + +G D +    T N
Sbjct: 359 QADQLSANRKKAIKVVEEQTSITLKKVGMLNAKLVLDQKVLGEL-NKDGLDEINLLFTAN 417

Query: 420 PGQPLQPIAKVASGGELSRIGLGIQVITAKKVATPTLIFDEVDVGISGPTAAVVGKMLRA 479
            GQ   P+ KVASGGELSR+ L I+ + AK  + PT+IFDE+D GISG TA  VG+++  
Sbjct: 418 AGQAPAPVNKVASGGELSRLMLAIKALLAKHTSLPTIIFDEIDTGISGETALKVGEVIAD 477

Query: 480 LGESTQVLCVTHLPQVAGNGHQHMFVNKQSKAGQTETSMVPLDKGQRIEELARLLGGDVI 539
           LG++ QV+ +THLPQ+A  G  H FV+K    G+T T +  L + +RI  +A +L G   
Sbjct: 478 LGQNMQVISITHLPQIAAKGISHYFVHKNEDRGKTTTGIRKLKQEERIGVIAEMLSGKNP 537

Query: 540 TNNTLANAKELL 551
             + + NA+ELL
Sbjct: 538 GASAMENARELL 549