Pairwise Alignments

Query, 553 a.a., recombination and repair protein (RefSeq) from Shewanella loihica PV-4

Subject, 553 a.a., DNA repair protein RecN (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  287 bits (734), Expect = 8e-82
 Identities = 196/556 (35%), Positives = 285/556 (51%), Gaps = 11/556 (1%)

Query: 1   MLCQLSINNFAIVRFLELDFKSGMTSITGETGAGKSIAIDALGLCLGNRADANTVRPGAS 60
           ML +L I +  I+  L LDF++G+  +TGETGAGKSI +DALG  LG R  A+ VR GA+
Sbjct: 1   MLARLDIRDILIIDHLVLDFRAGLNVLTGETGAGKSILLDALGFVLGWRGRADLVRQGAA 60

Query: 61  KAEVSARFALN-DIPLAKRWLEDNDLELDDECILRRTIGSDGRSRAYINGNPVPLNQMRA 119
           + EV+A F L  D P           + + E ILRR    +GR  AY+N        +RA
Sbjct: 61  QGEVTAVFDLAPDHPAFAVLRAAGFPDPEGELILRRVNTGEGRKSAYVNDRACSGTVLRA 120

Query: 120 LGQQLIGIHGQHAHHAMLKSEHQLTLLDSYANHKMLLEACSASYQRFKLIQKELSQLQQS 179
           L   L+ +HGQ     +L  +    LLD +  H  L    +++++     Q  L   +  
Sbjct: 121 LSDVLVELHGQQDDRGLLDPKGHRALLDDFGGHDRLRREVASAWRARAAAQSALETARAE 180

Query: 180 QHERIARKQLLQYQVEELDEFALGEEEFDEIEAEHKKLANGTALIQACQRTLYLLQDNEE 239
                A ++ L++ V ELD       E  E++   +++     +     R L  L   + 
Sbjct: 181 VAAVAADEEFLRHAVGELDALDPQPGEEAELDIARRRMQAAEKIRADVARALQALIAPDG 240

Query: 240 GAIESLLNMSLDQAQELEGYDPELKGVGNM----LNDALIQVQESSSELQRYLDKLELDP 295
           GA ESL+   +D  + LEG   E  G  +     L+ AL+++ E+S   +R LD L +DP
Sbjct: 241 GA-ESLV---VDATRWLEGVAAEADGALDAPIGALSRALVELGEASDGTERALDGLGVDP 296

Query: 296 EHFAALEQRLSKIMMLARKHHVNAKDLYQHHQALSQELSELDSDEEKLDEIAQQLESCRE 355
                 E+RL  +  LARKH V A DL      L   L+ LD+  ++L  + Q L     
Sbjct: 297 LELERTEERLFALRGLARKHGVAADDLGGFADTLRARLNTLDAGADRLQGLEQALAEAEA 356

Query: 356 SFIAHAQKLSQSRQRYAKELDKQVTRSIHELSMPKGKFIIDVQFNPEMMSPNGCDTVEFQ 415
           ++ A A  L+ +R+  A  LD  +   +  L M +  F    +  P    P+G D V F+
Sbjct: 357 AYAAAAGALTAARRAAAGRLDAAMADELAPLKMERAVF--GTEITPAAPGPDGADQVTFR 414

Query: 416 VTTNPGQPLQPIAKVASGGELSRIGLGIQVITAKKVATPTLIFDEVDVGISGPTAAVVGK 475
           V TNPG P   + K+ASGGELSR  L ++V         TLIFDE+D G+ G TA  VG+
Sbjct: 415 VATNPGAPAGALNKIASGGELSRFLLALKVCLTAGTEGLTLIFDEIDRGVGGATADAVGR 474

Query: 476 MLRALGESTQVLCVTHLPQVAGNGHQHMFVNKQSKAGQTETSMVPLDKGQRIEELARLLG 535
            L++L E+ QVL VTH PQVA  G  H  V K  +A  T + +VPL    R++E+AR++ 
Sbjct: 475 RLQSLAEAGQVLVVTHSPQVAALGAHHWRVEKTVQADVTLSRVVPLAPPDRVDEIARMMS 534

Query: 536 GDVITNNTLANAKELL 551
           GDV+T+   A A+ LL
Sbjct: 535 GDVVTDAARAAARALL 550