Pairwise Alignments

Query, 553 a.a., recombination and repair protein (RefSeq) from Shewanella loihica PV-4

Subject, 568 a.a., DNA repair protein RecN from Ralstonia sp. UNC404CL21Col

 Score =  379 bits (974), Expect = e-109
 Identities = 226/552 (40%), Positives = 329/552 (59%), Gaps = 6/552 (1%)

Query: 1   MLCQLSINNFAIVRFLELDFKSGMTSITGETGAGKSIAIDALGLCLGNRADANTVRPGAS 60
           ML  L+I +F IV  L+LD   G T  TGETGAGKSI IDAL L LG RADA  VR GA 
Sbjct: 1   MLRSLTIRDFVIVHALDLDLADGFTVFTGETGAGKSILIDALALTLGERADAAVVREGAP 60

Query: 61  KAEVSARFALNDIPLAKRWLEDNDLELDDECIL-RRTIGSDGRSRAYINGNPVPLNQMRA 119
           +A+++A F ++  P    WLE ++L  D+  IL RRT+ + GRS+A+ING  V L Q+R 
Sbjct: 61  RADITAEFDVH--PHVVAWLEAHELHDDEGVILLRRTVDAAGRSKAFINGAAVTLAQLRE 118

Query: 120 LGQQLIGIHGQHAHHAMLKSEHQLTLLDSYANHKMLLEACSASYQRFKLIQKELSQLQQS 179
           +G+QL+ IHGQHAH  +LK++ Q +LLD++A  +  +      Y+ +  + +     +Q 
Sbjct: 119 VGEQLVDIHGQHAHQLLLKTDAQRSLLDAHAGLESAVRMVGERYREWHAVVRAREAAEQQ 178

Query: 180 QHERIARKQLLQYQVEELDEFALGEEEFDEIEAEHKKLANGTALIQACQRTLYLLQDNEE 239
             E    ++ +++QV EL +      E++EI+AEH +L++  +LI+  +  L  L ++E 
Sbjct: 179 SREAQLERERIEWQVNELQKLGPQPGEWEEIQAEHHRLSHAASLIEGTRAALDGLSESE- 237

Query: 240 GAIESLLNMSLDQAQELEGYDPELKGVGNMLNDALIQVQESSSELQRYLDKLELDPEHFA 299
           GA+ + L  +L   +EL   DP L  V   L  A +Q+QE+   L RY D+ ELDP+  A
Sbjct: 238 GAVLTQLGATLHTLRELAEIDPALADVLAALEPAEVQIQEAVHTLARYADRAELDPDRLA 297

Query: 300 ALEQRLSKIMMLARKHHVNAKDLYQHHQALSQELSELDSDEEKLDEIAQQLESCRESFIA 359
            ++ R+  +  +ARK+ V  + L         +L+ L +  + LD +  Q      +++ 
Sbjct: 298 EVDARMQALHTMARKYRVAPETLPAELAERQAQLAALQAASD-LDALQAQEAQAHAAYMT 356

Query: 360 HAQKLSQSRQRYAKELDKQVTRSIHELSMPKGKFIIDVQFNPEMMSPNGCDTVEFQVTTN 419
            AQ LS+ R + A+EL   VT ++  LSM  G+F I +    +     G + VEF V  +
Sbjct: 357 VAQSLSRDRAKAARELADAVTGAMQGLSMAGGRFDIALHAL-DQGGAAGLEQVEFLVAGH 415

Query: 420 PGQPLQPIAKVASGGELSRIGLGIQVITAKKVATPTLIFDEVDVGISGPTAAVVGKMLRA 479
            G   +P+AKVASGGEL+RI L I VI ++   TPTLIFDEVD GI G  A VVG+ LR 
Sbjct: 416 AGVSPRPLAKVASGGELARISLAISVIASEASPTPTLIFDEVDSGIGGAVAEVVGRRLRE 475

Query: 480 LGESTQVLCVTHLPQVAGNGHQHMFVNKQSKAGQTETSMVPLDKGQRIEELARLLGGDVI 539
           LG   QVLCVTHLPQVA   + H+ V KQ+ AG T + +V LD   R++E+AR+LGG  +
Sbjct: 476 LGMRRQVLCVTHLPQVAALANHHIQVAKQTVAGSTRSDLVVLDATGRVDEIARMLGGASL 535

Query: 540 TNNTLANAKELL 551
           T+ T  +A E+L
Sbjct: 536 TDTTRRHADEML 547