Pairwise Alignments

Query, 553 a.a., recombination and repair protein (RefSeq) from Shewanella loihica PV-4

Subject, 556 a.a., DNA repair protein from Burkholderia phytofirmans PsJN

 Score =  385 bits (988), Expect = e-111
 Identities = 228/559 (40%), Positives = 331/559 (59%), Gaps = 13/559 (2%)

Query: 1   MLCQLSINNFAIVRFLELDFKSGMTSITGETGAGKSIAIDALGLCLGNRADANTVRPGAS 60
           ML  LSI +F IV  L+L+F SG T  +GETGAGKSI IDAL L LG RADAN VR G S
Sbjct: 1   MLRHLSIRDFVIVAALDLEFDSGFTVFSGETGAGKSILIDALALALGARADANVVRTGES 60

Query: 61  KAEVSARFALNDIPLAKRWLEDNDLELDDE-------CILRRTIGSDGRSRAYINGNPVP 113
           +A+++A F  +     ++WL++  L    E        +LRR + ++GRSRA+ING    
Sbjct: 61  RADLTAEFETH--AQVEQWLDEQALGTTGEDGHHGNTVMLRRVVDANGRSRAFINGTAAT 118

Query: 114 LNQMRALGQQLIGIHGQHAHHAMLKSEHQLTLLDSYANHKMLLEACSASYQRFKLIQKEL 173
           L Q+R +G+ L+ IHGQHAH  +++ + Q  L D++A       + + +++ ++   + +
Sbjct: 119 LAQLREVGEMLVDIHGQHAHQLLMRPDAQRELFDTHAGLSDTAASVTRAWRAWREKVQAV 178

Query: 174 SQLQQSQHERIARKQLLQYQVEELDEFALGEEEFDEIEAEHKKLANGTALIQACQRTLYL 233
              Q    E    ++ L +Q+ ELD+ A    E++E+ AEH++L++   LI   Q  L  
Sbjct: 179 EHAQTRDRELQLERERLAWQLTELDKLAPQPGEWEEVNAEHRRLSHSANLIDGVQGALGA 238

Query: 234 LQDNEEGAIESLLNMSLDQAQELEGYDPELKGVGNMLNDALIQVQESSSELQRYLDKLEL 293
           L +++E  I  L ++ + + ++L   DP L  V   L  A IQ+QE++  L  Y  KLEL
Sbjct: 239 LSESDEAMITHLSSI-VSKVRDLAEIDPALNDVLAALEPAEIQLQEAAYSLSHYAQKLEL 297

Query: 294 DPEHFAALEQRLSKIMMLARKHHVNAKDLYQHHQALSQELSELDSDEEKLDEIAQQLESC 353
           DP+  A +E+RL  +   ARK  +  + L + H+A   +L+ LD+  + LD +       
Sbjct: 298 DPDRLAQVEKRLDALHSAARKFRLQPQTLPEEHEARRAQLAALDAAAD-LDSLHAAEAKA 356

Query: 354 RESFIAHAQKLSQSRQRYAKELDKQVTRSIHELSMPKGKFIIDVQFNPEMMSPNGCDTVE 413
           +E+F+  A+KLS++R +  K L   VT  + ELSM  G F + +   PE    +G + VE
Sbjct: 357 KEAFLTEAKKLSKARAKAGKALGAAVTTGMQELSMKGGSFEVALVPLPEG-GAHGLEQVE 415

Query: 414 FQVTTNPGQPLQPIAKVASGGELSRIGLGIQVITAKKVATPTLIFDEVDVGISGPTAAVV 473
           F+V  + G PL+P+AKVASGGEL+RI L + VI +    TPTLIFDEVD GI G  A VV
Sbjct: 416 FRVAGHAGVPLRPLAKVASGGELARISLALAVIASAASPTPTLIFDEVDTGIGGGVAEVV 475

Query: 474 GKMLRALGESTQVLCVTHLPQVAGNGHQHMFVNKQSKA-GQTETSMVPLDKGQRIEELAR 532
           G++L  LG+  QVLCVTHLPQVA  G  H  V K     G T +S+  LDK  R+EE+AR
Sbjct: 476 GRLLHQLGQQRQVLCVTHLPQVAARGDHHFQVAKAGNGKGGTVSSVTSLDKASRVEEVAR 535

Query: 533 LLGGDVITNNTLANAKELL 551
           +LGG  IT  T  +AKE+L
Sbjct: 536 MLGGLEITPTTRKHAKEML 554