Pairwise Alignments

Query, 124 a.a., sigma 54 modulation protein/ribosomal protein S30EA (RefSeq) from Shewanella loihica PV-4

Subject, 118 a.a., ribosomal subunit interface protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  159 bits (401), Expect = 2e-44
 Identities = 83/124 (66%), Positives = 96/124 (77%), Gaps = 6/124 (4%)

Query: 1   MIKITSKDFEVTTPIRERIESRLEKLSRHDVQLINPHVIIGQEKQGFKIEASVGIPSNTL 60
           M+KITSK FEVTTPIRER+ESR EKL+RHDV LINPH+II QEK  FKIEASVG+P   L
Sbjct: 1   MLKITSKQFEVTTPIRERVESRFEKLARHDVPLINPHIIISQEKTLFKIEASVGVPQGDL 60

Query: 61  FAQAKDKDLYAAINAMGQKLEKQLNRLSHKPEGARYTAPATSPTPESAELDDEYDETIDK 120
           FAQAK ++LYAAI AMGQKLEKQLNRL+HKPE  R  A   +   E  + +D+Y+E    
Sbjct: 61  FAQAKSENLYAAITAMGQKLEKQLNRLTHKPEAKR--ADTQAVAAEEVDFEDDYEE---- 114

Query: 121 EYAA 124
           EYAA
Sbjct: 115 EYAA 118