Pairwise Alignments

Query, 124 a.a., sigma 54 modulation protein/ribosomal protein S30EA (RefSeq) from Shewanella loihica PV-4

Subject, 101 a.a., ribosome-associated translation inhibitor RaiA from Pseudomonas fluorescens SBW25-INTG

 Score = 67.0 bits (162), Expect = 7e-17
 Identities = 36/89 (40%), Positives = 58/89 (65%), Gaps = 2/89 (2%)

Query: 2  IKITSKDFEVTTPIRERIESRLEKLSRHDVQLINPHVIIGQEKQGFKIEASVGIPSNTLF 61
          + I+    EVT P+RE  ES+L KL+ H  ++ N  VI+  +K   KIEA++ +P+  L 
Sbjct: 3  VNISGHQLEVTKPLREYTESKLNKLAGHFDKITNVQVIMEVDKLKQKIEATLHVPNAKLV 62

Query: 62 AQAKDKDLYAAINAMGQKLEKQLNRLSHK 90
          A A+ +D+YAAI+++  KL++QL  + HK
Sbjct: 63 ANAEHEDMYAAIDSLYDKLDRQL--IKHK 89