Pairwise Alignments

Query, 231 a.a., DNA repair protein RecO (RefSeq) from Shewanella loihica PV-4

Subject, 286 a.a., DNA repair protein RecO from Herbaspirillum seropedicae SmR1

 Score = 99.8 bits (247), Expect = 5e-26
 Identities = 76/223 (34%), Positives = 113/223 (50%), Gaps = 5/223 (2%)

Query: 4   GYVLHTRPYRESSVLVNLLVDGLGRVDAVARLGSGKTS-IKSILQPFQPLLFQLSGRSSL 62
           G+VLH+ PY+E+S+++++     GRV  VA+      S ++  LQ FQPL    SG+S +
Sbjct: 59  GFVLHSYPYKETSLIIDVFSRDHGRVALVAKGAKRPHSKLRGALQTFQPLSLSWSGKSEV 118

Query: 63  KSLYQVEAASPAVPLSGNDSFAGFYLNELLVRCLSVEHGAEQFFFTYHKTLMAMA-AAFS 121
           ++L   E     +PL  +    GFYLNELLV+ L+ E      F  Y  TL  +A    +
Sbjct: 119 RTLTDAEWVGGLLPLEKSALLCGFYLNELLVKLLAREDAHPALFDHYVATLNKLAHGENA 178

Query: 122 EAQLRQFELSLLKELGVMPS-LNLDIEGSPIETDFYYRLLSEEGF-STALGPKPNHFSGE 179
              LRQFE  LLK+ GV  +  +  + G  +  D  Y +  E+G     L  +    SG+
Sbjct: 179 PIVLRQFERILLKQTGVAGNWSHCVVSGKTVRPDLIYVVDPEQGTRPERLSDRAPKVSGK 238

Query: 180 MLRALE-EDRLTEADFKQAKLLMRQLLSPLLGDKPLKSRALFL 221
            L  +E ED        Q+K LMR LL+  LG   L +R + +
Sbjct: 239 TLLDMEREDYSDPTTQLQSKFLMRYLLAHHLGGAQLNTRQILI 281