Pairwise Alignments

Query, 264 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

Subject, 267 a.a., putative permease from Dechlorosoma suillum PS

 Score =  208 bits (530), Expect = 8e-59
 Identities = 107/253 (42%), Positives = 152/253 (60%), Gaps = 1/253 (0%)

Query: 9   IALGAFIGFMAGLLGIGGGVIAVPVLLFLLPMAGVVPEHLTHVAIATSLAAIILTGASSA 68
           + LG F GFMAGLLGIGGG + VP+L  +       PE + H+A+ TS+A II T  SS 
Sbjct: 11  VGLGLFAGFMAGLLGIGGGAVMVPLLAMIFAGQQFPPEQMLHLALGTSMATIIFTAISSL 70

Query: 69  RAHHARGNIPWHLLTIMLPGLIVGALSAGFISSLFSAQLLKQVFAGFLVLMALQMVFPFK 128
           R HH  G + W  L    PG++VG +    +++  S Q L   FA F+  +ALQM   FK
Sbjct: 71  RTHHQHGAVMWDTLRSFTPGVLVGTVLGTQLAARISTQGLALFFACFISCVALQMALNFK 130

Query: 129 AAEGERSLPASPYLFVTAMFVAIIAALMGIGGGILFIPFLTWCGVQMRHAIGFSSVTGLM 188
             +  R LP    L +    +  +++L+ IGGG L +P+L WC V +R+AIG S+  GL 
Sbjct: 131 P-KPHRELPGPAGLGLAGGVIGALSSLVAIGGGSLTVPYLAWCNVPVRNAIGTSAALGLP 189

Query: 189 IALFGSLSYVFAGWATQGLPEYTLGYIYLPALFGIVCTSMLTAPLGAKAASVWPTARLKK 248
           IA FG+L Y++ GW   GLP +++GY+YLPAL  ++  S++ AP+GA+ A   P A LK+
Sbjct: 190 IAFFGTLGYIWNGWGEAGLPAWSVGYVYLPALLWVMAGSVVAAPVGARLAHRLPVATLKR 249

Query: 249 IFAVMLFFTGIKL 261
           IFA +L     K+
Sbjct: 250 IFAGVLVLLAAKM 262



 Score = 37.7 bits (86), Expect = 3e-07
 Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 22/126 (17%)

Query: 12  GAFIGFMAGLLGIGGGVIAVPVLLFL-LPMAGVVPEHLTHVAIATSLA-----AIILTGA 65
           G  IG ++ L+ IGGG + VP L +  +P+   +    T  A+   +A       I  G 
Sbjct: 147 GGVIGALSSLVAIGGGSLTVPYLAWCNVPVRNAIG---TSAALGLPIAFFGTLGYIWNGW 203

Query: 66  SSARAHHARGNIPWHLLTIMLPGLI---VGALSAGFISSLFSAQL----LKQVFAGFLVL 118
             A      G   W +  + LP L+    G++ A  + +  + +L    LK++FAG LVL
Sbjct: 204 GEA------GLPAWSVGYVYLPALLWVMAGSVVAAPVGARLAHRLPVATLKRIFAGVLVL 257

Query: 119 MALQMV 124
           +A +M+
Sbjct: 258 LAAKML 263