Pairwise Alignments

Query, 601 a.a., DNA primase (RefSeq) from Shewanella loihica PV-4

Subject, 581 a.a., DNA primase from Klebsiella michiganensis M5al

 Score =  545 bits (1405), Expect = e-159
 Identities = 291/572 (50%), Positives = 393/572 (68%), Gaps = 15/572 (2%)

Query: 29  IPREFINELVARTDIVDLIDAKVPLKKAGKNHSACCPFHSEKSPSFTVSRDKQFYHCFGC 88
           IPR FIN+L+ARTDIVDLIDA+V LKK GKN+ ACCPFH+EK+PSFTV+ +KQFYHCFGC
Sbjct: 5   IPRVFINDLLARTDIVDLIDARVKLKKQGKNYHACCPFHNEKTPSFTVNGEKQFYHCFGC 64

Query: 89  GAHGNAIDFVMEYDRLDFVDAIEELAGRLGLEVPREQGTGKRRDEGLSR-DLYQLMEEAS 147
           GAHGNAIDF+M YD+L+FV+ +EELA    L+VP E G+G  + E   R +LYQLM+  +
Sbjct: 65  GAHGNAIDFLMNYDKLEFVETVEELAAMHNLDVPYEAGSGPSQIERHQRQNLYQLMDGLN 124

Query: 148 RYFQSQLKQHTDKQKVLDYLAHRGLSDEVIEHFNIGFAPDGWDGLLGRYRQNQDAQDKLL 207
            ++Q  L Q         YL  RGLS EVI  F IG+AP GWD +L R+  NQ+ +  L+
Sbjct: 125 TFYQQSLMQPA-ADPARQYLEKRGLSSEVITRFAIGYAPPGWDNVLKRFGGNQENRQSLI 183

Query: 208 TAGMVIENDSGKRYDRFRDRLMFPIRDRRGRVIGFGGRVLGDGTPKYLNSPETPIFHKGY 267
            AGM++ ND G+ YDRFR+R+MFPIRD+RGRVIGFGGRVLGD  PKYLNSPET IFHKG 
Sbjct: 184 DAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVLGDALPKYLNSPETDIFHKGR 243

Query: 268 ELYGLYELKQRHRDPSQILIVEGYMDVVALTQFGVDYAVASLGTSTTADQFQLLLRSAKE 327
           +LYGLYE +Q + +PS++L+VEGYMDVVAL QFG++YAVASLGTSTTAD  QLL R   +
Sbjct: 244 QLYGLYEAQQDNAEPSRLLVVEGYMDVVALAQFGINYAVASLGTSTTADHIQLLFRVTNQ 303

Query: 328 VICCYDGDKAGTEAAWRALETALPLLKPGDQVKFMFLPQGEDPDSLVRQIGKPAFEQLIA 387
           V+CCYDGD+AG +AAWRALETALP +  G Q++FMFLP GEDPD+LVR+ GK AFE  + 
Sbjct: 304 VVCCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDGEDPDTLVRKEGKAAFEARME 363

Query: 388 EAKLLPEFLFDTLASRYGTD----KGTLAKQAMSLIEKVQDTVLQSLLLENLAYKLGMNS 443
           +A+ L  FLF++L  +        +  L+  A+ LI +V    L+  L + L  KLG+  
Sbjct: 364 QAQPLSTFLFNSLLPQVDLSTPDGRAQLSTLALPLITQVPGETLRIYLRQELGNKLGILD 423

Query: 444 AEELQRKLGFKRIDANKPLQNKALKGRGTPLRLAIALLVQHPHLGNNLPVQPALKHIKMA 503
             +L+R +  +   +   +Q  A + + T +R+ I LLVQ+P L   +P    L   KM 
Sbjct: 424 DAQLERLMPKQ---SENGIQRPAPQLKRTTMRILIGLLVQNPDLAPLVPPLEGLDPRKMP 480

Query: 504 GIDLLSLLLDRTRAEK-VNSAQLLEQFRGDDQLDTLKKLAQWEHQVADENL-QQEFKKAL 561
           G+ L + L+    A+  + +  LLEQ+RG ++  TL+KL+ W+  +AD+++ ++ F  +L
Sbjct: 481 GLGLFNELVKTCLAQPGLTTGLLLEQYRGTNEAATLEKLSMWD-DIADKDIAEKTFTDSL 539

Query: 562 IWLNNQYIEQRYQELSLKQHH---TKEERMQL 590
             + +  +E R +EL  +      + EER +L
Sbjct: 540 NHMFDSLLELRQEELIARDRTHGLSSEERREL 571