Pairwise Alignments

Query, 601 a.a., DNA primase (RefSeq) from Shewanella loihica PV-4

Subject, 604 a.a., DNA primase from Cupriavidus basilensis FW507-4G11

 Score =  357 bits (915), Expect = e-102
 Identities = 223/562 (39%), Positives = 305/562 (54%), Gaps = 34/562 (6%)

Query: 29  IPREFINELVARTDIVDLIDAKVPLKKAGKNHSACCPFHSEKSPSFTVSRDKQFYHCFGC 88
           IP+ FI +L+ R DIVD++   V LKK G N    CPFH+EKSPSFTVS  KQFYHCFGC
Sbjct: 2   IPQSFIQDLLNRVDIVDVVGKYVQLKKGGANFMGLCPFHNEKSPSFTVSPTKQFYHCFGC 61

Query: 89  GAHGNAIDFVMEYDRLDFVDAIEELAGRLGLEVPREQG----TGKRRDEGLSRDLYQLME 144
            AHG+AI F+MEY    + DA+ ELA  +GL VP E+       +   +  S  L   M 
Sbjct: 62  AAHGSAIGFLMEYSGQSYPDAVRELAQSVGLSVPEERDRLAPAQRAEVQARSLALSDAMT 121

Query: 145 EASRYFQSQLKQHTDKQKVLDYLAHRGLSDEVIEHFNIGFAPDGWDGL---LGRYRQNQD 201
            A+ +++ QL+      + + YL  RGL+ E+   F +G+APD W GL    G YR +  
Sbjct: 122 RATEFYRKQLRS---APQAIQYLKSRGLTGEIAAQFGLGYAPDDWQGLEPVFGNYRDDAI 178

Query: 202 AQDKLLTAGMVIEN-------DSGKRYDRFRDRLMFPIRDRRGRVIGFGGRVLGDGTPKY 254
           A   L+ AG++IE+          +RYDRFRDR+MFPIR  +G+VIGFGGRV+G G PKY
Sbjct: 179 A-GPLVEAGLMIESAEKRDADGKPRRYDRFRDRIMFPIRSTKGQVIGFGGRVMGQGEPKY 237

Query: 255 LNSPETPIFHKGYELYGLYELKQRHRDPSQILIVEGYMDVVALTQFGVDYAVASLGTSTT 314
           LNSPETP+F KG ELYGL+E +   R+   +L+VEGYMDVVAL Q G   AVA+LGT+ T
Sbjct: 238 LNSPETPLFSKGTELYGLFEARHAIRETGYVLVVEGYMDVVALAQLGFANAVATLGTACT 297

Query: 315 ADQFQLLLRSAKEVICCYDGDKAGTEAAWRALETALPLLKPGDQVKFMFLPQGEDPDSLV 374
           A   Q LLR    V+  +DGD AG  AA RALE  LP +     ++F+FLP   DPDS V
Sbjct: 298 AVHVQKLLRQTDAVVFSFDGDAAGRRAARRALEACLPYVADNKTIRFLFLPAEHDPDSYV 357

Query: 375 RQIGKPAFEQLIAEAKLLPEFLFDTLAS----RYGTDKGTLAKQAMSLIEKVQDTVLQSL 430
           R+ G  AF   + +A  L  FL   ++     R    +     +A  L++ +    L+  
Sbjct: 358 REQGTDAFAAQVRDAMPLSRFLLQVVSEGQELRQAEGRARAQYEAKPLLQSMPAGGLRLQ 417

Query: 431 LLENLAYKLGMNSAE-ELQRKLGFKRIDANKPLQNKALKGRGTPLRL---AIALLVQHPH 486
           ++  LA   G   AE E    L        +  Q +    R  P  L    + LL+++P 
Sbjct: 418 IVRELADATGTTPAEIEAVCGLASDPARVGRFAQPRPRTKRQAPTGLEQRVLQLLMRYPQ 477

Query: 487 LGNNLPV--QPALKHIKMAGIDLLSLLL---DRTRAEKVNSAQLLEQFRGDDQLDTLK-- 539
           L + L    +  L   + A  ++L+ L+   D  R E VN A   E        +     
Sbjct: 478 LSSRLDADSRALLLEDEQADAEVLAHLVSACDELRGE-VNFAAFSEHLAQSPYAEVYANV 536

Query: 540 KLAQWEHQVADENLQQEFKKAL 561
           + A    ++ +E  +QEF  A+
Sbjct: 537 RAAVLREEIDEEPAEQEFDTAI 558