Pairwise Alignments

Query, 816 a.a., response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella loihica PV-4

Subject, 959 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  363 bits (932), Expect = e-104
 Identities = 193/467 (41%), Positives = 291/467 (62%), Gaps = 1/467 (0%)

Query: 349 DGTTFQIEDSAAPITDSEGKVTGGIIVFHDCSESVAMSLKMSHLANHDQLTDLPNRILLH 408
           DG+ +    + + + D  G+ +  I  F D +E  A   ++ HLA +D LT+LPNR+LL 
Sbjct: 482 DGSLYPEWLNISSVRDEGGQASHYIAAFSDITERKAAEAQVRHLAEYDALTNLPNRVLLQ 541

Query: 409 DRINHACAVADSYDKSVALMLIDIDHFKYLNDSLGHSYGDQVIKQVAKRLQSLIDPNATL 468
           DR+  A A A      +AL+ +D+D FK +NDSLGH+ GDQV+ QV +RL + +  + T+
Sbjct: 542 DRLGQAIAAARRAGSCLALLFLDLDRFKNINDSLGHTVGDQVLCQVGERLLTAVRASDTV 601

Query: 469 GRIGGDEFVLLLPSLTATSQVDSIATDIVRSLNTPFRIDGQEYTLSVSVGISIYPSDALR 528
            R+GGDEFVLLLP L + +Q  S+A  ++ +L TP  ID  E  ++ S+GI+++P D   
Sbjct: 602 SRLGGDEFVLLLPQLESPAQAASVAEKLLLTLATPLAIDDYELAVTPSIGIAVFPEDGED 661

Query: 529 AEELMTHVDAAMYRAKDLGRNRFCYFSEDLEQELTKRHELVTLLRTAIDTEAIEVYYQPK 588
            + L+ + DAAMY AK+ GRN + YF+  +   +++R  L   LR A+  + + ++YQP+
Sbjct: 662 GDTLLKNADAAMYVAKESGRNNYQYFTAAMNARVSQRLLLENNLRQALARQELALHYQPQ 721

Query: 589 VDLKTKEIIGAEALARLYDPSGKLISPLDFIPLAEETGLIHQLGEIILKQSCMAAKAWQK 648
            DL +  ++G EAL R   P   LI P  FIP+AEETGLI  +G+ +L+++C  A+AWQ 
Sbjct: 722 YDLHSGTLVGCEALLRWRQPEQGLIPPDRFIPVAEETGLILPIGQWVLREACRQAQAWQD 781

Query: 649 RG-RPLQIAVNIAAKQFTNPEFCDSVAKVLELTGLDSSFLELEVTESSLMYDFDEALNVL 707
            G  PL +AVNI+A QF        V + L  +GL   +LELE+TES LM D +     L
Sbjct: 782 AGLPPLVVAVNISAVQFRQANLAALVQEALAASGLSPCWLELELTESMLMEDGERHTQTL 841

Query: 708 NTLSSLGLSIAIDDFGTGYSSLSYLKFFPVNTLKIDQSFVKDMLGDEQSLDIVKAVIHLA 767
             L ++G+ +A+DDFGTGYSSL+YLK F ++ LKID+SF++D+  D +   I  A+I +A
Sbjct: 842 AQLKAMGIRLALDDFGTGYSSLAYLKRFSLDKLKIDRSFIRDLPQDAEDAAITTAIIGMA 901

Query: 768 KSLKLKLIAEGIEDAEQLQKLVALECEQGQGYMFSKPLPLKEFDQLL 814
           + L L+ +AEG+E  +Q   L    C Q QG++ ++P+P  E   LL
Sbjct: 902 RDLGLETLAEGVETEQQWSFLAERGCAQMQGFLRARPMPADEITALL 948