Pairwise Alignments

Query, 378 a.a., spermidine/putrescine ABC transporter ATPase subunit (RefSeq) from Shewanella loihica PV-4

Subject, 388 a.a., Spermidine/putrescine ABC transporter ATP-binding subunit (NCBI) from Rhodospirillum rubrum S1H

 Score =  434 bits (1116), Expect = e-126
 Identities = 220/367 (59%), Positives = 274/367 (74%), Gaps = 2/367 (0%)

Query: 13  TKTQGEVLLKIERVSKLFDDVRAVDDVSLNINRGEIFALLGGSGSGKSTLLRMLAGFEKP 72
           TK  G  +++IE V K F D  AV  VSL++  GE   LLGGSG GK+TLLRM+AGFE+P
Sbjct: 23  TKKLGPPIIEIETVVKKFGDFTAVAGVSLDVFEGEFLCLLGGSGCGKTTLLRMMAGFEQP 82

Query: 73  TEGRIYLDGQDITDMPPYERPINMMFQSYALFPHMTVAQNIAFGLKQDKMPKAEIEQRVK 132
           T GRI +DG+D+T +PPY+RP+NMMFQSYALFPHM+V QNIAFGLKQD MPKAE E RV 
Sbjct: 83  TSGRILIDGRDMTGVPPYDRPVNMMFQSYALFPHMSVEQNIAFGLKQDGMPKAEREARVA 142

Query: 133 EMLKLVHMEPYAKRKPNQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRTQMQLE 192
           EML LV +E +AKRKP+QLSGGQRQRVALARSLAK P++LLLDEP+ ALDKKLR + QL+
Sbjct: 143 EMLSLVQLERFAKRKPHQLSGGQRQRVALARSLAKHPRVLLLDEPLSALDKKLRERTQLD 202

Query: 193 VVDILEAVGVTCVMVTHDQEEAMTMAERIAIMNDGWIAQTGSPMDIYESPANRMVAEFIG 252
           +V+I E  G+T V+VTHDQEEAMTMA+R+AIM++GWI Q  +P  +YE P  R VAEF G
Sbjct: 203 LVNIQEKTGITFVVVTHDQEEAMTMADRVAIMDEGWIVQIDAPQSMYEYPNTRFVAEFFG 262

Query: 253 SVNLFEGDIVEDEVDHVVINVANIPQPFYVGYGVSTSVDTTQVWVAIRPEKTHISREQPE 312
           SVN+FEG +VEDE DHV+I    +  P YVG+GVS     T VW A+RPEK  +  E+P+
Sbjct: 263 SVNMFEGVLVEDEPDHVMIEAPELENPIYVGHGVSGHEGAT-VWAALRPEKVTLVTEKPD 321

Query: 313 DARNWCAGKVEDIAYLGGISVYYIRLCNGQLIQSVMTNSDRRAD-SPTWEEDVFVSWEAT 371
              NW AG+V+DI YLG  S Y + L  G+ ++  + N +R  +   TW + V+VSW AT
Sbjct: 322 RPYNWAAGEVKDIVYLGSTSTYIVGLDTGKRMRVTVANHERDVEWEITWGDRVYVSWAAT 381

Query: 372 SAVVLRS 378
           SAVV+ S
Sbjct: 382 SAVVVSS 388